Factsheet for Os03t0792400-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

plastid: 21433289

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0227500-00	Rice	nucleus, plastid	1.52	9.86
Os03t0792500-02	Rice	cytosol	3.25	3.48
Os08t0128700-01	Rice	cytosol	2.16	2.7
Os07t0167200-01	Rice	cytosol	2.16	2.36
Os07t0655300-01	Rice	plastid	1.08	1.15
Os04t0625400-00	Rice	plastid	0.65	0.91
Os08t0128900-00	Rice	cytosol, plastid	0.22	0.28
Os08t0226800-00	Rice	cytosol	0.22	0.28
TraesCS7B01G211200.1	Wheat	cytosol, mitochondrion	0.22	0.26
Os04t0625600-01	Rice	cytosol	0.22	0.26
Os08t0129300-00	Rice	cytosol	0.22	0.2
TraesCS7D01G307900.1	Wheat	cytosol, plastid	0.0	0.0
Os08t0226400-00	Rice	cytosol	0.0	0.0
TraesCS7B01G211100.1	Wheat	cytosol, plastid	0.0	0.0
TraesCS7A01G311400.1	Wheat	cytosol	0.0	0.0
Os08t0228200-00	Rice	mitochondrion	0.0	0.0
TraesCS7D01G308000.1	Wheat	cytosol	0.0	0.0
Os08t0227400-00	Rice	cytosol	0.0	0.0
Os08t0227200-02	Rice	cytosol	0.0	0.0
Os08t0227100-01	Rice	cytosol	0.0	0.0
HORVU7Hr1G074420.1	Barley	cytosol	0.0	0.0
Os07t0101400-01	Rice	cytosol	0.0	0.0
Os04t0625500-00	Rice	plastid	0.0	0.0
HORVU7Hr1G074430.1	Barley	cytosol	0.0	0.0

Protein Annotations

MapMan:18.10.3.1	ProteinID:AAO37991.2	EMBL:AK064808	ProteinID:BAS86794.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004222	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091
GO:GO:0006508	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008237
GO:GO:0009416	GO:GO:0009507	GO:GO:0009536	GO:GO:0009605	GO:GO:0009606	GO:GO:0009628
GO:GO:0009630	GO:GO:0009658	GO:GO:0009719	GO:GO:0009723	GO:GO:0009959	GO:GO:0009987
GO:GO:0010027	GO:GO:0010207	GO:GO:0015979	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0016787	GO:GO:0019538	GO:GO:0031969	GO:GO:0043157	GO:GO:0048564	GO:GO:0060359
EnsemblPlantsGene:Os03g0792400	EnsemblPlants:Os03t0792400-01	PANTHER:PTHR31412	PANTHER:PTHR31412:SF11	TMHMM:TMhelix	UniParc:UPI00003B919D
SEG:seg	:	:	:	:	:

Description

Similar to mRNA, clone: RTFL01-01-G24. (Os03t0792400-01);Similar to predicted protein. (Os03t0792400-02)

Coordinates

chr3:+:32951544..32956773

Molecular Weight (calculated)

49771.6 Da

IEP (calculated)

5.004

GRAVY (calculated)

0.330

Length

462 amino acids

Sequence
(BLAST)

001: MRSERTRSGS FSSSSSSSSG TPGISNEPPF LSFSVDNIDT VKLLELLGPE KVDSADVKAI KEKLFGYTTF WLTREEPFGD LGEGVLFIGN LRGKREEIFA
101: KLQQQLRELT GDKYNLFMVE EPNSEGEDPR GGPRVSFGLL RREVSEPGPT TLWQYVISLL LFLLTVFSCV ELGIASKISS LPPEIVTYFT DPNATGPPPD
201: MQLLLPFVES ALPVAYGVLA IQLFHEVGHF LAAFPKKVKL SIPFFIPNFT LGTFGAITQF KSILPDKKTM FDISMAGPLA GAALSFSMFS VGLLLSSNPA
301: GASDLVEVPS KLFQGSLLLG LVSRATLGYR AMHAATVAIH PLVIAGWCGL TTTAFNMLPV GCLDGGRALQ GAFGKDALFG FGLTTYSLLG LGVLGGPLSL
401: PWGLYVLICQ RTPEKPCLND VSDVGTWRRA ALIVSVFLVV LTLIPLWDEL AEDLGVGLVT SF

Best Arabidopsis Sequence Match ( AT5G35220.1 )
(BLAST)

001: MGTLTSVAFA AAVNIRFRSF HRENIKTTIT TLPKWQKRLC FSSTEDSHRF RIAKCLGNDE NSNRDDSIGE NGETHKSSVV KTATFEEEDE ETSKSSSTTS
101: SSNEFGSDKT SMPSTIDPTY SSFQIDSFKL MELLGPEKVD PADVKLIKDK LFGYSTFWVT KEEPFGDLGE GILFLGNLRG KKEDVFAKLQ RKLVEVASDK
201: YNLFMIEEPN SEGPDPRGGA RVSFGLLRKE VSEPGPTTLW QYVIALILFL LTIGSSVELG IASQINRLPP EVVKYFTDPN AVEPPDMELL YPFVDAALPL
301: AYGVLGILLF HELGHFLAAV PKKVKLSIPY FIPNITLGSF GAITQFKSIL PDRSTKVDIS LAGPFAGAAL SVSMFAVGLF LSTEPDAAND LVQVPSMLFQ
401: GSLLLGLISR ATLGYAALHA ATVSIHPLVI AGWCGLTTTA FNMLPVGCLD GGRAVQGAFG KNALVTFGLS TYVMLGLRVL GGPLALPWGL YVLICQRTPE
501: KPCLNDVTEV GTWRKALVGI ALILVVLTLL PVWDELAEEV GIGLVTTF

Arabidopsis Description

EGY1Probable zinc metalloprotease EGY1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q949Y5]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.