Factsheet for Os04t0625600-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G472400.1	Wheat	cytosol	74.1	79.4
TraesCS2A01G472700.1	Wheat	cytosol	74.1	79.4
TraesCS2B01G495400.1	Wheat	cytosol	73.59	78.85
HORVU3Hr1G084920.2	Barley	cytosol	52.82	77.74
KXG27151	Sorghum	plastid	67.69	68.39
HORVU2Hr1G106750.2	Barley	plastid	71.54	58.86
Os04t0625400-00	Rice	plastid	42.05	49.7
Os04t0625500-00	Rice	plastid	44.1	45.87
Os08t0227400-00	Rice	cytosol	26.41	45.18
Os08t0226800-00	Rice	cytosol	36.15	38.84
Os08t0227200-02	Rice	cytosol	34.1	37.46
Os08t0226400-00	Rice	cytosol	34.87	37.26
Os07t0101400-01	Rice	cytosol	37.44	36.96
Os07t0655300-01	Rice	plastid	38.21	34.33
Os08t0227100-01	Rice	cytosol	33.08	33.42
Os07t0167200-01	Rice	cytosol	35.64	32.78
Os03t0792500-02	Rice	cytosol	35.38	32.02
Os08t0228200-00	Rice	mitochondrion	34.1	31.89
Os08t0128900-00	Rice	cytosol, plastid	29.23	31.58
Os08t0227500-00	Rice	nucleus, plastid	5.38	29.58
Os08t0129300-00	Rice	cytosol	36.41	27.73
Os08t0128700-01	Rice	cytosol	1.54	1.62
Os03t0792400-01	Rice	plastid	0.26	0.22

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:4337063	ProteinID:BAF15854.1
ProteinID:BAS91111.1	InterPro:BPM_C	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	EnsemblPlantsGene:Os04g0625600	EnsemblPlants:Os04t0625600-01
PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF224
UniProt:Q0J9Y3	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695
InterPro:TRAF-like	UniParc:UPI0000DD92A7	RefSeq:XP_015633709.1	SEG:seg	:	:

Description

MATH-BTB protein 6, MDC protein with a BTB domain 6, MDC protein having BTB domain 6Kelch related domain containing protein. (Os04t0625600-01)

Coordinates

chr4:+:31811661..31813399

Molecular Weight (calculated)

42888.3 Da

IEP (calculated)

6.555

GRAVY (calculated)

-0.058

Length

390 amino acids

Sequence
(BLAST)

001: MDIGPHSIQL IAPPSLYHAA SAAAMGDHRD PAFPAAAGGC RLPKTSSVSV TESVTAVHDF KVTGYSLIEG LGIGRYVSSS TFTVGGVDWA VRFYPDGSTV
101: TCLGNASAFL YYCGREKEVR TRFTLNLLGK DGKLSQVTNS YMKHTFSPAS DNWGFIKFAE KSKLQSSPFL HNDCLTIRCL LTVVRESHTK DVEVNSVVVP
201: PSNLHTDFEN MLQDGEGSDV TFTVGGQEFR AHKCVLAFRS PVFKAELFGP MKENGTQCIK IDDMEPEVFE ALLHFIYTDR LPDSCRDGKA AAMQHLLVAA
301: DRYGVDRLRL ICERRLSETI DVETVATTLV LAEQHHCSQL RQACIGFVAS PNMLGPVIES DGFKHLVESC PLIMKEILSK VSHIWIDKSC

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.