Factsheet for Os07t0655300-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0746000-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G06190.1	Os02t0746000-01	AT1G26830.1	15772280

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G023850.1	Barley	cytosol, plastid	82.72	91.58
EER99824	Sorghum	plastid	89.63	91.31
Zm00001d022366_P001	Maize	plastid	88.71	91.23
Zm00001d007068_P001	Maize	plastid	88.94	90.61
TraesCS2B01G159700.1	Wheat	mitochondrion, plastid	86.64	88.47
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	86.64	88.47
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	86.18	88.0
GSMUA_Achr6P23740_001	Banana	plastid	73.73	76.92
GSMUA_Achr6P16160_001	Banana	plastid	73.73	76.74
VIT_07s0104g00570.t01	Wine grape	cytosol	70.28	75.87
VIT_05s0020g02520.t01	Wine grape	plastid	71.2	75.74
Solyc09g072980.2.1	Tomato	cytosol	69.59	73.3
KRG95474	Soybean	plastid	69.12	73.17
PGSC0003DMT400009802	Potato	plastid	68.43	72.79
KRH71465	Soybean	plastid	68.43	72.09
KRH31976	Soybean	plastid	68.43	71.91
KRH67156	Soybean	plastid	67.05	70.98
CDY66705	Canola	cytosol	65.21	70.22
CDY58342	Canola	cytosol	64.98	69.98
Bra001186.1-P	Field mustard	cytosol	64.98	69.98
CDY08064	Canola	cytosol	64.98	69.29
Bra002200.1-P	Field mustard	cytosol	63.82	69.25
CDY05245	Canola	cytosol	63.13	69.19
Bra006489.1-P	Field mustard	cytosol	64.06	68.98
Bra020764.1-P	Field mustard	cytosol	60.83	68.57
CDY24708	Canola	cytosol	63.36	68.24
AT3G06190.1	Thale cress	cytosol	63.82	68.23
Bra040233.1-P	Field mustard	cytosol	61.06	68.12
Solyc01g080250.2.1	Tomato	plastid	61.98	66.09
PGSC0003DMT400011115	Potato	plastid	61.75	65.85
AT5G19000.2	Thale cress	plastid	67.05	65.84
CDX70860	Canola	cytosol	63.82	62.95
CDX92567	Canola	cytosol	63.59	62.87
CDY13941	Canola	cytosol	63.59	62.87
CDY18844	Canola	cytosol	61.29	62.0
CDY02591	Canola	cytosol	56.45	61.25
Os07t0101400-01	Rice	cytosol	50.69	55.7
Os07t0167200-01	Rice	cytosol	54.38	55.66
Os03t0792500-02	Rice	cytosol	54.61	54.99
Os08t0227400-00	Rice	cytosol	23.5	44.74
Os08t0226800-00	Rice	cytosol	35.25	42.15
Os08t0226400-00	Rice	cytosol	34.56	41.1
Os08t0227200-02	Rice	cytosol	32.26	39.44
Os04t0625400-00	Rice	plastid	29.26	38.48
Os04t0625600-01	Rice	cytosol	34.33	38.21
Os04t0625500-00	Rice	plastid	31.57	36.53
Os08t0228200-00	Rice	mitochondrion	33.64	35.01
Os08t0227100-01	Rice	cytosol	30.18	33.94
Os08t0227500-00	Rice	nucleus, plastid	5.53	33.8
Os08t0128900-00	Rice	cytosol, plastid	25.58	30.75
Os08t0129300-00	Rice	cytosol	33.41	28.32
Os03t0792400-01	Rice	plastid	1.15	1.08
Os08t0128700-01	Rice	cytosol	0.69	0.81

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:4344139	EMBL:AK073258
ProteinID:BAC20790.1	ProteinID:BAF22409.1	ProteinID:BAT02991.1	InterPro:BPM_C	InterPro:BTB/POZ_dom	ProteinID:EEE67726.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	EnsemblPlantsGene:Os07g0655300	EnsemblPlants:Os07t0655300-01	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144
PANTHER:PTHR24411	PANTHER:PTHR24411:SF37	UniProt:Q8H3E5	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225
SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI00000AD826	RefSeq:XP_015647312.1	SEG:seg

Description

MATH-BTB protein 11, MDC protein with a BTB domain 11, MDC protein having BTB domain 11Kelch related domain containing protein. (Os07t0655300-01)

Coordinates

chr7:+:27545277..27550186

Molecular Weight (calculated)

47096.3 Da

IEP (calculated)

6.777

GRAVY (calculated)

-0.075

Length

434 amino acids

Sequence
(BLAST)

001: MGAGRACRGG PSSSSPAAAA AAVGRPFPPI AASCPFSSSS AAAAAPAAPS ETASTSVTKT VNGSHHFKIA GYPLAKGIGV GKYIASECFT VGGYDWAIYF
101: YPDGKSPEDG AAYVSLFIAL ASEGTDVRAL FELTLVDQSG KGQDKVHTHF GRSLEGGPYT LKYRGSMWGY KRFFKRSALE TSDYLKDDCL LVNCTVGVVQ
201: SHTEGPKIYT IPVPPSNMSQ HIGQLLTDGK RTDITFEVDG EVFPAHKVVL AARSPVFRAQ LFGPMKDKNM KRITIEDMEA SVFKALLHFM YWDELPDIEE
301: LTGLNTTWVS TLMAQHLLAA ADRYALERLK LLCELKLCED VAINTVANTL ALAEQHHCYQ LKTVCLRFVA LPENLKAVMQ TDGFDYLQQS CPSLLTELLE
401: YVAKVGEHSV SPCLYSNEVL DGGDANGRRV KPRI

Best Arabidopsis Sequence Match ( AT5G19000.1 )
(BLAST)

001: MGTTRVCSEV SSGSSKSLSQ SLTVSTSTTE TVNGFHEFKI CGYSLAKGVG VGKYVASDTF MVGGYSWAIY FYPDGKSPED NSSYVSLFIA LASEGADVRA
101: LFELTLVDQS GNGKHKVHSH FGRALDSGPY TLKYRGSMWG YKRFFRRSSL ESSDYLKENS LLVRCRVGVV KSVTEGPRYY NIPVPVSNLG QQLGNLLESG
201: KGCDVVFQVD GETFNAHKLV LATRSPVFNA QLFGPLGDRN TKCITIEDME APIFKVLLHF IYWDELPDMQ ELIGTDSTLA STLVAQHLLA AADRYALERL
301: KAICESKLCE GVAINTVATT LALAEQHHCL QLKAVCLKFV ALPENLKAVM QTDGFDYLKE SCPSLLTELL QYVARLSEHS VIVSGHRKEI FADGCDASGR
401: RVKPRLH

Arabidopsis Description

BPM1BPM1 [Source:UniProtKB/TrEMBL;Acc:A0A178UFC0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.