Factsheet for VIT_07s0104g00570.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 2
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95474	Soybean	plastid	88.06	86.34
VIT_05s0020g02520.t01	Wine grape	plastid	86.57	85.29
KRH67156	Soybean	plastid	86.07	84.39
Solyc09g072980.2.1	Tomato	cytosol	85.57	83.5
KRH71465	Soybean	plastid	85.57	83.5
PGSC0003DMT400009802	Potato	plastid	84.33	83.09
KRH31976	Soybean	plastid	85.32	83.05
GSMUA_Achr6P16160_001	Banana	plastid	80.6	77.7
GSMUA_Achr6P23740_001	Banana	plastid	79.1	76.44
HORVU2Hr1G023850.1	Barley	cytosol, plastid	74.13	76.02
Zm00001d022366_P001	Maize	plastid	76.62	72.99
EER99824	Sorghum	plastid	76.62	72.3
Zm00001d007068_P001	Maize	plastid	76.37	72.07
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	74.88	70.82
TraesCS2B01G159700.1	Wheat	mitochondrion, plastid	74.88	70.82
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	74.88	70.82
Os07t0655300-01	Rice	plastid	75.87	70.28
VIT_13s0019g02260.t01	Wine grape	cytosol	63.43	62.81
VIT_06s0009g01030.t01	Wine grape	cytosol	58.71	55.79
VIT_08s0056g01670.t01	Wine grape	plastid	57.96	54.06

Protein Annotations

Gene3D:1.25.40.420	EntrezGene:100258076	wikigene:100258076	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1
InterPro:BPM_C	InterPro:BTB/POZ_dom	ProteinID:CBI32329	ProteinID:CBI32329.3	UniProt:D7TPA6	EMBL:FN596005
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
EntrezGene:LOC100258076	wikigene:LOC100258076	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144
PANTHER:PTHR24411	PANTHER:PTHR24411:SF37	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599
SUPFAM:SSF54695	TIGR:TC61445	InterPro:TRAF-like	UniParc:UPI0001BE3FE3	ArrayExpress:VIT_07s0104g00570	EnsemblPlantsGene:VIT_07s0104g00570
EnsemblPlants:VIT_07s0104g00570.t01	RefSeq:XP_002271534	RefSeq:XP_002271534.2	RefSeq:XP_010652109.1	SEG:seg	:

Description

No Description!

Coordinates

chr7:-:1782280..1786977

Molecular Weight (calculated)

44530.3 Da

IEP (calculated)

6.866

GRAVY (calculated)

-0.137

Length

402 amino acids

Sequence
(BLAST)

001: MGKVCREGGK PSSSSPLVTT STSITETVNG SHQFKITGYS LSKGLGIGKY IASDTFVVGG YAWAIYFYPD GKSVEDNAAY VSLFIALASE GTDVRALFEL
101: TLLDQSGKER HKVHSHFGRP LESGPYTLKY RGSMWGYKRF FKRTALETSD YLKDDCLSVH CSVGLVRSHT EGPKIYSIAV PPCNIGQHFG QLLESGKGTD
201: VNFEVDGETF SAHKLVLAAR SPVFRAQLFG PMKDQNTQCI KVEDMEAPVF KALLHFIYWD SLPDMEELTG LNSKWASTLM AQHLLAAADR YGLDRLRLLC
301: ESNLCEDVAI NTVATTLALA EQHHCFQLKA VCLKFVAMPE NLRAVMQTDG FEYLKESCPS VLTELLEYVA RVSEHSVIVC RHGNEAILDG SDINGRRVKQ
401: RL

Best Arabidopsis Sequence Match ( AT3G06190.1 )
(BLAST)

001: MDTIRVSKEV PGSSKSTAQS LTESTSRTET INGSHEFKIS GYSLVKGMGI GKYVASDTFM VGGYSWAIYF YPDGKSPEDN SVYVSLFIAL ASEGADVRAL
101: FELTLVDQSG NERHKVHSHF GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN IPVPVSGLGQ QFGKLLESGK
201: GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR
301: TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKAVME TDGFDYLKES CPSLLSELLE YVARLSEHSL TSSGHRKELF ADGCDLNGRR
401: VKQRLH

Arabidopsis Description

BPM2BTB/POZ and MATH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.