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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 4
  • cytosol 3
  • nucleus 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, peroxisome, plastid
BaCelLo:plastid
ChloroP:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:plastid
PTS1:peroxisome
TargetP:plastid
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400009802 Potato plastid 97.82 98.77
VIT_07s0104g00570.t01 Wine grape cytosol 83.5 85.57
KRG95474 Soybean plastid 80.83 81.22
KRH71465 Soybean plastid 79.13 79.13
KRH67156 Soybean plastid 78.64 79.02
KRH31976 Soybean plastid 79.13 78.93
GSMUA_Achr6P16160_001 Banana plastid 75.73 74.82
HORVU2Hr1G023850.1 Barley cytosol, plastid 71.12 74.74
GSMUA_Achr6P23740_001 Banana plastid 73.06 72.36
Solyc01g080250.2.1 Tomato plastid 70.87 71.74
Zm00001d022366_P001 Maize plastid 73.3 71.56
Zm00001d007068_P001 Maize plastid 73.3 70.89
EER99824 Sorghum plastid 73.3 70.89
TraesCS2A01G135800.1 Wheat mitochondrion, plastid 72.33 70.12
TraesCS2D01G138300.1 Wheat mitochondrion, plastid 72.33 70.12
TraesCS2B01G159700.1 Wheat mitochondrion, plastid 72.09 69.88
Os07t0655300-01 Rice plastid 73.3 69.59
Solyc05g052960.2.1 Tomato cytosol 58.74 59.31
Solyc01g009060.2.1 Tomato cytosol 57.52 58.52
Solyc11g072070.1.1 Tomato cytosol 56.8 57.35
Protein Annotations
Gene3D:1.25.40.420Gene3D:2.60.210.10Gene3D:3.30.710.10MapMan:35.1InterPro:BPM_CInterPro:BTB/POZ_dom
GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:IPR000210InterPro:IPR002083InterPro:IPR008974
UniProt:K4CUX4InterPro:MATH/TRAF_domPFAM:PF00651PFscan:PS50097PFscan:PS50144PANTHER:PTHR24411
PANTHER:PTHR24411:SF37InterPro:SKP1/BTB/POZ_sfSMART:SM00061SMART:SM00225SUPFAM:SSF49599SUPFAM:SSF54695
EnsemblPlantsGene:Solyc09g072980.2EnsemblPlants:Solyc09g072980.2.1InterPro:TRAF-likeUniParc:UPI000276B186SEG:seg:
Description
No Description!
Coordinates
chr9:-:65641897..65648166
Molecular Weight (calculated)
45599.2 Da
IEP (calculated)
6.343
GRAVY (calculated)
-0.165
Length
412 amino acids
Sequence
(BLAST)
001: MVDMGRVETE AIAKPSSSSS SSSSSSAVTT STSVTETVNG SHDFKITGYS LSKGIGIGKY IASDTFMVGG YTWAIYFYPD GKSTEDNSTY VSLFIALASE
101: GTDVRALFEL TLIDQSGKSR HKVHSHFGRA LESGPYTLKY RGSMWGYKRF FKRTALESSD YLKDDCLQVH CCVGVVRSHT EGPKTYSIPL SPSDIGLHFG
201: QLLESGKDTD VNFDVNGEVF AAHKLVLAAR SPVFRAQLFG PMKDQNTEHI KVEDMEAPVF KALLHFMYWD VLPDMEELTG LNTKWASTLM SQHLLAAADC
301: YGLDRLRLLC EANLCEEVAI NTVATTLALA EQHHCFQLKS VCLKFVAMPE NLRAVMQTDG FDYLRESCPH VLTELLEYVA RVNEHSSITN KLGNGLVLDG
401: GDFNGRRVKQ RL
Best Arabidopsis Sequence Match ( AT3G06190.1 )
(BLAST)
001: MDTIRVSKEV PGSSKSTAQS LTESTSRTET INGSHEFKIS GYSLVKGMGI GKYVASDTFM VGGYSWAIYF YPDGKSPEDN SVYVSLFIAL ASEGADVRAL
101: FELTLVDQSG NERHKVHSHF GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN IPVPVSGLGQ QFGKLLESGK
201: GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR
301: TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKAVME TDGFDYLKES CPSLLSELLE YVARLSEHSL TSSGHRKELF ADGCDLNGRR
401: VKQRLH
Arabidopsis Description
BPM2BTB/POZ and MATH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.