Factsheet for Os08t0128900-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 4
cytosol 2
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0227400-00	Rice	cytosol	24.93	39.47
Os08t0226800-00	Rice	cytosol	38.23	38.02
Os08t0226400-00	Rice	cytosol	37.12	36.71
Os08t0227200-02	Rice	cytosol	33.52	34.08
Os08t0228200-00	Rice	mitochondrion	37.4	32.37
HORVU7Hr1G074430.1	Barley	cytosol	31.58	31.93
TraesCS7D01G308000.1	Wheat	cytosol	31.02	31.37
Os08t0227500-00	Rice	nucleus, plastid	6.09	30.99
TraesCS7B01G211100.1	Wheat	cytosol, plastid	31.3	30.96
Os04t0625500-00	Rice	plastid	32.13	30.93
HORVU7Hr1G074420.1	Barley	cytosol	24.93	30.93
TraesCS7D01G307900.1	Wheat	cytosol, plastid	31.02	30.6
Os08t0227100-01	Rice	cytosol	32.13	30.05
TraesCS7B01G211200.1	Wheat	cytosol, mitochondrion	31.86	29.72
Os04t0625400-00	Rice	plastid	27.15	29.7
Os04t0625600-01	Rice	cytosol	31.58	29.23
TraesCS7A01G311400.1	Wheat	cytosol	14.68	29.12
Os07t0101400-01	Rice	cytosol	30.75	28.1
Os08t0129300-00	Rice	cytosol	37.95	26.76
Os07t0167200-01	Rice	cytosol	30.19	25.71
Os07t0655300-01	Rice	plastid	30.75	25.58
Os03t0792500-02	Rice	cytosol	29.64	24.83
Os08t0128700-01	Rice	cytosol	0.83	0.81
Os03t0792400-01	Rice	plastid	0.28	0.22

Protein Annotations

Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A0P0XBI2	ProteinID:BAT03681.1	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	EnsemblPlantsGene:Os08g0128900	EnsemblPlants:Os08t0128900-00	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144
PANTHER:PTHR44756	PANTHER:PTHR44756:SF1	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695
InterPro:TRAF-like	UniParc:UPI000017D1BE	SEG:seg	:	:	:

Description

MATH-BTB protein 17, MDC protein with a BTB domain 17, MDC protein having BTB domain 17BTB/POZ-like domain containing protein. (Os08t0128900-00)

Coordinates

chr8:+:1634452..1635537

Molecular Weight (calculated)

39860.9 Da

IEP (calculated)

9.212

GRAVY (calculated)

-0.112

Length

361 amino acids

Sequence
(BLAST)

001: MVISSIGHSQ QARSDSEMAS SRPISESTIT RSTCATRTAR ATHQFEIVGY SLKRCLAAGE FVRSSAFAAC GYRWSVRVYP GGFGPAHREF VSVFVKMMTN
101: RGKAAARFDL RLIDRATGLP RSVFRAAQPV VFDYSVKHKK CKGKRGTRAF MRRRDLESSA FVRDDRLIVE CVIDVVVANG GDDDTAAAAS PLAGVPAPDL
201: SRHLGELLER ADGVGADVTF DVRGQPFAAH RIVLAMRSPV FMASLYGSMR EHRAPRIAVD DMEPEVFDAL LRFVYSDTLA LPGDLGEGEY KEMVRQLLEA
301: ADRYAMDRLR VICELILSRS LDAKTVAATL AMADQHSTTA TRSRMFVFSS WPLGWMTTIN D

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.