Factsheet for Os08t0128700-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0227500-00	Rice	nucleus, plastid	0.54	2.82
Os03t0792400-01	Rice	plastid	2.7	2.16
Os04t0625600-01	Rice	cytosol	1.62	1.54
Os08t0227100-01	Rice	cytosol	1.35	1.3
Os04t0625400-00	Rice	plastid	1.08	1.21
Os08t0128900-00	Rice	cytosol, plastid	0.81	0.83
TraesCS7B01G211200.1	Wheat	cytosol, mitochondrion	0.81	0.78
Os08t0228200-00	Rice	mitochondrion	0.81	0.72
Os07t0655300-01	Rice	plastid	0.81	0.69
Os04t0625500-00	Rice	plastid	0.54	0.53
Os07t0101400-01	Rice	cytosol	0.54	0.51
Os08t0227200-02	Rice	cytosol	0.27	0.28
HORVU7Hr1G074430.1	Barley	cytosol	0.27	0.28
TraesCS7D01G308000.1	Wheat	cytosol	0.27	0.28
Os08t0226800-00	Rice	cytosol	0.27	0.28
Os08t0226400-00	Rice	cytosol	0.27	0.27
TraesCS7B01G211100.1	Wheat	cytosol, plastid	0.27	0.27
TraesCS7D01G307900.1	Wheat	cytosol, plastid	0.27	0.27
Os07t0167200-01	Rice	cytosol	0.27	0.24
Os08t0129300-00	Rice	cytosol	0.27	0.2
Os08t0227400-00	Rice	cytosol	0.0	0.0
TraesCS7A01G311400.1	Wheat	cytosol	0.0	0.0
Os03t0792500-02	Rice	cytosol	0.0	0.0
HORVU7Hr1G074420.1	Barley	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:4344580	ProteinID:BAC66705.1
ProteinID:BAF22827.1	ProteinID:BAT03680.1	InterPro:BPM_C	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	EnsemblPlantsGene:Os08g0128700
EnsemblPlants:Os08t0128700-01	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF212
UniProt:Q84US4	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
UniParc:UPI000017D1BC	RefSeq:XP_015649108.1	RefSeq:XP_015649109.1	SEG:seg	:	:

Description

MATH-BTB protein 18, MDC protein with a BTB domain 18, MDC protein having BTB domain 18Kelch related domain containing protein. (Os08t0128700-01)

Coordinates

chr8:+:1628504..1631173

Molecular Weight (calculated)

41781.2 Da

IEP (calculated)

5.081

GRAVY (calculated)

-0.233

Length

370 amino acids

Sequence
(BLAST)

001: MASRSISSCT TETAKGIHRF EIFSYSMMNT EAEDDSIRSG VFNVGGFDWA LLYYPDGIDD DSKGYIGVYL ELISKNGEPW ALVDVNLINQ LQPGQPRQLF
101: TKTDVPTPFR SSSFQESTLG SLKCMKRSDI ESTPGFIVND CIVIECNVTV IYEPKVSKTR ALCDAETSSA LREIEVPPME ISSDFAKMLK DGVGADVTFR
201: VGEDTFRAHR AVLAARSPVF HAQLCGPMKE KKETQMQEIT IQDMQPSVFE AFLYFIYTDC VPRMDDLGNG EKMHLMMHLL KAGDRYGLER LRIMCERFLA
301: TNLDTEHVSA ILGLADLLDL KKLKEACMEF MVPSERMDAV AASQGYQQLK RAFPSLAFEV WERRSRVRRN

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.