Factsheet for HORVU3Hr1G084920.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G472400.1	Wheat	cytosol	94.34	68.68
TraesCS2B01G495400.1	Wheat	cytosol	93.96	68.41
TraesCS2A01G472700.1	Wheat	cytosol	93.58	68.13
HORVU2Hr1G106750.2	Barley	plastid	100.0	55.91
Os04t0625600-01	Rice	cytosol	77.74	52.82
KXG27151	Sorghum	plastid	74.72	51.3
HORVU5Hr1G089030.1	Barley	cytosol	53.21	39.72
HORVU2Hr1G106560.1	Barley	plastid	53.21	39.5
HORVU5Hr1G110530.1	Barley	cytosol	35.85	38.31
HORVU6Hr1G034020.1	Barley	plastid	33.58	34.77
HORVU7Hr1G074420.1	Barley	cytosol	37.74	34.36
HORVU5Hr1G108760.1	Barley	cytosol	40.0	31.09
HORVU1Hr1G020270.1	Barley	mitochondrion, plastid	40.0	30.37
HORVU7Hr1G114550.1	Barley	cytosol, plastid	42.26	30.11
HORVU5Hr1G009850.1	Barley	cytosol	39.25	29.71
HORVU0Hr1G010120.1	Barley	plastid	39.25	29.46
HORVU2Hr1G112920.1	Barley	cytosol	37.36	28.21
HORVU2Hr1G023850.1	Barley	cytosol, plastid	41.13	27.81
HORVU7Hr1G074430.1	Barley	cytosol	37.36	27.73
HORVU5Hr1G108800.1	Barley	cytosol	35.09	27.27
HORVU5Hr1G104190.1	Barley	cytosol	38.11	25.0
HORVU2Hr1G064920.1	Barley	plastid	40.0	24.65
HORVU5Hr1G009860.1	Barley	cytosol, peroxisome	40.75	24.49
HORVU6Hr1G069480.1	Barley	plastid	40.75	22.74
HORVU2Hr1G055140.1	Barley	cytosol	38.11	22.0

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A287M153	InterPro:BPM_C
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU3Hr1G084920	EnsemblPlants:HORVU3Hr1G084920.2
InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097
PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF224	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599
SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI000B463F63	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:610229408..610230508

Molecular Weight (calculated)

29757.9 Da

IEP (calculated)

5.606

GRAVY (calculated)

-0.140

Length

265 amino acids

Sequence
(BLAST)

001: MEKDGRLSQV TNSYMKHTFS PASDNWGFIK FIEKSKIQGS PFLDNDCLTI RCLITVAKES RTQDVETNSI LVPPSNLHQD FGNMLRDGEG ADVTFTVCGQ
101: LFPAHRCVLA FRSPVFRAEL FGPLREDATE CIKIDDMEPM IFEALLHFIY TDTLPDNCKD GKAAAMQHML VAADRYGVDR LRLLCERKLS EAIDVETVAT
201: TLALAEQHHC SQLRGACVRF MASPDMLGPV MLTDGFKHLV ASCPLILKDV LDEVSRIWRD KPSEK

Best Arabidopsis Sequence Match ( AT3G06190.1 )
(BLAST)

001: MDTIRVSKEV PGSSKSTAQS LTESTSRTET INGSHEFKIS GYSLVKGMGI GKYVASDTFM VGGYSWAIYF YPDGKSPEDN SVYVSLFIAL ASEGADVRAL
101: FELTLVDQSG NERHKVHSHF GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN IPVPVSGLGQ QFGKLLESGK
201: GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR
301: TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKAVME TDGFDYLKES CPSLLSELLE YVARLSEHSL TSSGHRKELF ADGCDLNGRR
401: VKQRLH

Arabidopsis Description

BPM2BTB/POZ and MATH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.