Factsheet for HORVU5Hr1G108800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G108760.1	Barley	cytosol	90.62	90.62
TraesCS5B01G460600.1	Wheat	cytosol	74.49	70.95
TraesCS5D01G462100.1	Wheat	cytosol	73.9	70.39
TraesCS5A01G451900.1	Wheat	cytosol	73.31	69.64
HORVU5Hr1G110530.1	Barley	cytosol	43.99	60.48
Os08t0227400-00	Rice	cytosol	34.31	51.32
EER99574	Sorghum	cytosol	54.25	50.68
KXG24755	Sorghum	mitochondrion	55.72	50.53
EES14737	Sorghum	cytosol	50.44	48.45
EES14736	Sorghum	cytosol	49.85	47.89
KXG24756	Sorghum	cytosol	46.92	45.07
HORVU1Hr1G020270.1	Barley	mitochondrion, plastid	43.11	42.12
HORVU6Hr1G034020.1	Barley	plastid	31.09	41.41
HORVU5Hr1G009850.1	Barley	cytosol	40.76	39.71
HORVU7Hr1G114550.1	Barley	cytosol, plastid	41.94	38.44
HORVU2Hr1G112920.1	Barley	cytosol	39.3	38.18
HORVU7Hr1G074430.1	Barley	cytosol	39.3	37.53
HORVU0Hr1G010120.1	Barley	plastid	38.12	36.83
HORVU7Hr1G074420.1	Barley	cytosol	30.5	35.74
HORVU3Hr1G084920.2	Barley	cytosol	27.27	35.09
HORVU2Hr1G023850.1	Barley	cytosol, plastid	39.59	34.44
Os08t0227500-00	Rice	nucleus, plastid	7.04	33.8
HORVU6Hr1G069480.1	Barley	plastid	43.7	31.37
HORVU5Hr1G009860.1	Barley	cytosol, peroxisome	40.18	31.07
HORVU2Hr1G106560.1	Barley	plastid	32.26	30.81
HORVU5Hr1G089030.1	Barley	cytosol	31.67	30.42
HORVU5Hr1G104190.1	Barley	cytosol	34.6	29.21
HORVU2Hr1G106750.2	Barley	plastid	38.12	27.43
HORVU2Hr1G055140.1	Barley	cytosol	35.48	26.36
HORVU2Hr1G064920.1	Barley	plastid	32.84	26.05

Protein Annotations

Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A287SNH5	InterPro:BTB/POZ_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU5Hr1G108800	EnsemblPlants:HORVU5Hr1G108800.1	InterPro:IPR000210	InterPro:IPR002083
InterPro:IPR008974	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379
PANTHER:PTHR26379:SF179	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
UniParc:UPI000B462CF5	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:628822406..628823428

Molecular Weight (calculated)

34557.5 Da

IEP (calculated)

5.960

GRAVY (calculated)

-0.217

Length

341 amino acids

Sequence
(BLAST)

001: MGACKTASTC SPDEAQGTHV FNILGYSKHR GMGSKHDCYI RSKSFTVGGL DWAIRFYPDG LETQDHISVY LELLSKRTKV RASCDLRLVD QCTGLSSSVH
101: KTGPRLFSFD DSTRFAPQFS ELKKRSEIEG EGSVYLRDDR LTIECMVTVM EKPHVADTKP FPKIDVPPSD MTADVGRLLE EKEGFDVTFI VGGETIEAHR
201: FVLAMRSPVL KAELYGPMRE ARPGQYITIE DMQPAVFKAL LHFIYTDSLP RDTDLEGHKD TDMVQLLLVA ADKYALERLK LVCQSILCEG LNVDTVAMTL
301: ALADQHNCHX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX X

Best Arabidopsis Sequence Match ( AT2G39760.2 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGGT GCI

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.