Factsheet for HORVU5Hr1G009860.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	peroxisome
MultiLoc:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G047800.1	Wheat	peroxisome	73.7	86.67
TraesCS5A01G041000.1	Wheat	cytosol, mitochondrion, plastid	78.23	85.4
HORVU5Hr1G009850.1	Barley	cytosol	60.77	76.57
HORVU0Hr1G010120.1	Barley	plastid	60.09	75.07
HORVU2Hr1G112920.1	Barley	cytosol	58.05	72.93
HORVU1Hr1G020270.1	Barley	mitochondrion, plastid	42.86	54.15
HORVU7Hr1G114550.1	Barley	cytosol, plastid	40.36	47.85
HORVU5Hr1G108760.1	Barley	cytosol	34.69	44.87
HORVU5Hr1G110530.1	Barley	cytosol	23.81	42.34
HORVU3Hr1G084920.2	Barley	cytosol	24.49	40.75
HORVU5Hr1G108800.1	Barley	cytosol	31.07	40.18
HORVU6Hr1G034020.1	Barley	plastid	22.68	39.06
HORVU7Hr1G074420.1	Barley	cytosol	25.62	38.83
HORVU2Hr1G106560.1	Barley	plastid	30.61	37.82
HORVU7Hr1G074430.1	Barley	cytosol	29.02	35.85
HORVU2Hr1G023850.1	Barley	cytosol, plastid	31.75	35.71
HORVU5Hr1G089030.1	Barley	cytosol	28.34	35.21
HORVU6Hr1G069480.1	Barley	plastid	37.41	34.74
HORVU5Hr1G104190.1	Barley	cytosol	31.07	33.91
HORVU2Hr1G064920.1	Barley	plastid	30.84	31.63
HORVU2Hr1G106750.2	Barley	plastid	31.52	29.32
HORVU2Hr1G055140.1	Barley	cytosol	30.16	28.98

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A287QBM6	InterPro:BPM_C
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU5Hr1G009860	EnsemblPlants:HORVU5Hr1G009860.1
InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917
PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI000B46FB76	SEG:seg	:

Description

No Description!

Coordinates

chrchr5H:+:24600380..24601889

Molecular Weight (calculated)

49253.3 Da

IEP (calculated)

6.747

GRAVY (calculated)

-0.150

Length

441 amino acids

Sequence
(BLAST)

001: GLDREFRPDW PHPLHPHSPP PISTMEASQS SIAMVPARCT AETQSSRATV AFKIAGYSLH KGLGRGKYLC SPAFSVGGYE WCIRYYPDGS RDETSQGHVS
101: VFLKLLTKNA KVRARHNWML VDPLSGRSIV VLFGGEPHVF DHESPSWGLR RFMKTTAEEE SANVCNDCLV IECEVTVIKE TFDVHVPPSD LSDNLATLLE
201: GEKGADVTFK VQGEVFSAHK VLLAMRSPVF EAEFYGPLGN KGAQSGHAWL ADKNWLGSIW HFQQVTTQKL AKSLLLLRGW LGANQLLDKI LACLRIGEPN
301: FGRKPSSLDI TIDDMQPAVF RAFLHFIYTD SMPSMRDLED DDKIEMVKHL LVAADKYGME RMKRICEGML CMSLGVETVA AILALADQHH CSNLKDACIE
401: FMLSSNRMND VMASEGYVHL KRYCPDVIVD VFERAARSCK I

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.