Factsheet for HORVU5Hr1G009850.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	plastid
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G042000.1	Wheat	cytosol	82.29	82.05
HORVU0Hr1G010120.1	Barley	plastid	77.71	77.05
HORVU2Hr1G112920.1	Barley	cytosol	74.29	74.07
HORVU5Hr1G009860.1	Barley	cytosol, peroxisome	76.57	60.77
HORVU1Hr1G020270.1	Barley	mitochondrion, plastid	52.0	52.15
HORVU7Hr1G114550.1	Barley	cytosol, plastid	51.43	48.39
HORVU5Hr1G108760.1	Barley	cytosol	44.0	45.16
HORVU5Hr1G110530.1	Barley	cytosol	31.43	44.35
HORVU5Hr1G108800.1	Barley	cytosol	39.71	40.76
HORVU7Hr1G074420.1	Barley	cytosol	33.71	40.55
HORVU3Hr1G084920.2	Barley	cytosol	29.71	39.25
HORVU7Hr1G074430.1	Barley	cytosol	38.29	37.53
HORVU6Hr1G034020.1	Barley	plastid	27.43	37.5
HORVU2Hr1G023850.1	Barley	cytosol, plastid	40.57	36.22
HORVU2Hr1G106560.1	Barley	plastid	36.57	35.85
HORVU6Hr1G069480.1	Barley	plastid	48.57	35.79
HORVU5Hr1G089030.1	Barley	cytosol	36.29	35.77
HORVU5Hr1G104190.1	Barley	cytosol	40.0	34.65
HORVU2Hr1G055140.1	Barley	cytosol	39.43	30.07
HORVU2Hr1G064920.1	Barley	plastid	36.57	29.77
HORVU2Hr1G106750.2	Barley	plastid	37.71	27.85

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A287QBX6	InterPro:BPM_C
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU5Hr1G009850	EnsemblPlants:HORVU5Hr1G009850.1
InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917
PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061
SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI000B467E18	:

Description

No Description!

Coordinates

chrchr5H:+:24502613..24503665

Molecular Weight (calculated)

39073.1 Da

IEP (calculated)

6.941

GRAVY (calculated)

-0.206

Length

350 amino acids

Sequence
(BLAST)

001: MPASESSIVR LPSRCRAETA RATVAFEIAG YSLHKGLGRG KYLRSPSFSV GGYEWCIHYY PDGNKDEASQ GYVSVFLKLL TKNAEVRALH NSMLVDQARG
101: ASLVMHPFKE PKVFDHKKSW GVPNFMERTA QVESTYVRND CLMIDCEVSV IKETLDIHVP PSDLSDNLAT LLEGKKGADV TFKVRGEVFS AHKILLAMRS
201: AVFNAEFYGP MGDKGAHDIT IDDMQPVVFK AFLHFIYTDS MPPMDGLEDD DKREMVKHLL VAADKYAMER MKSICEGMLC KSLDVETVAS VLALADQHNC
301: SNLKDACTEF MLSSNRMKEV ISSQGYLHLK RSSPDVIVDV LERAAKSRKI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.