Factsheet for TraesCS5B01G042000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G042100.1	Wheat	cytosol	31.62	87.4
HORVU5Hr1G009850.1	Barley	cytosol	82.05	82.29
TraesCS5B01G042300.1	Wheat	plastid	76.07	76.07
TraesCS5B01G043200.1	Wheat	plastid	74.07	74.29
TraesCS6B01G443900.1	Wheat	cytosol	68.66	68.66
TraesCS2B01G384100.1	Wheat	cytosol	35.61	58.96
TraesCS3B01G026400.1	Wheat	cytosol	56.98	55.25
TraesCS2B01G383700.1	Wheat	mitochondrion	57.27	54.92
TraesCS3B01G060200.1	Wheat	cytosol	56.41	54.7
TraesCS2B01G574000.1	Wheat	cytosol, plastid	38.18	53.82
TraesCS2B01G383900.1	Wheat	mitochondrion	55.56	52.99
TraesCS2B01G383800.1	Wheat	mitochondrion	53.56	52.66
TraesCS7B01G421900.1	Wheat	cytosol	53.85	51.5
TraesCS1B01G111900.1	Wheat	mitochondrion, plastid	50.14	50.57
TraesCS3B01G345600.1	Wheat	cytosol, mitochondrion, plastid	52.14	50.41
TraesCS3B01G345400.1	Wheat	cytosol	51.85	49.86
TraesCS2B01G573200.1	Wheat	cytosol	46.44	49.24
TraesCS2B01G573600.1	Wheat	cytosol	45.87	49.24
TraesCS7B01G422800.1	Wheat	cytosol, plastid	51.28	48.78
TraesCS7B01G422200.1	Wheat	cytosol	49.86	48.75
TraesCS2B01G436900.1	Wheat	peroxisome	21.08	48.05
TraesCS7B01G423000.1	Wheat	cytosol, plastid	50.71	47.98
TraesCS1B01G387500.1	Wheat	cytosol, plastid	49.57	47.67
TraesCS3B01G025700.1	Wheat	cytosol	51.85	47.03
TraesCS6B01G303100.1	Wheat	cytosol	47.86	46.28
TraesCS2B01G573800.1	Wheat	plastid	36.18	45.85
TraesCS7B01G422300.1	Wheat	cytosol	47.58	45.38
TraesCS7B01G422500.1	Wheat	cytosol	47.58	45.38
TraesCS7B01G049700.1	Wheat	cytosol	45.58	44.94
TraesCS7B01G422400.1	Wheat	cytosol	47.01	44.84
TraesCS3B01G507600.1	Wheat	cytosol	36.47	43.69
TraesCS5B01G472700.1	Wheat	cytosol	43.87	43.63
TraesCS2B01G074000.1	Wheat	cytosol	42.17	43.27
TraesCS5B01G460400.1	Wheat	cytosol	44.73	43.25
TraesCS5B01G460300.1	Wheat	cytosol	44.73	43.25
TraesCS5B01G472600.1	Wheat	cytosol	43.87	43.14
TraesCS3B01G201600.1	Wheat	cytosol	42.17	43.02
TraesCS5B01G460600.1	Wheat	cytosol	43.87	43.02
TraesCS5B01G472100.1	Wheat	cytosol	43.02	42.78
TraesCS5B01G472500.1	Wheat	cytosol	42.17	41.93
TraesCS4B01G122200.1	Wheat	cytosol	42.45	40.6
TraesCS5B01G472400.1	Wheat	cytosol	31.91	40.43
TraesCS4B01G360400.1	Wheat	cytosol	39.03	38.59
TraesCS7B01G211100.1	Wheat	cytosol, plastid	39.89	38.36
TraesCS4B01G360000.1	Wheat	cytosol	37.04	36.31
TraesCS2B01G493600.1	Wheat	cytosol	37.32	36.29
TraesCS4B01G392200.1	Wheat	cytosol	37.04	36.21
TraesCS7B01G211200.1	Wheat	cytosol, mitochondrion	39.89	36.18
TraesCS2B01G495400.1	Wheat	cytosol	37.32	35.99
TraesCS2B01G496400.1	Wheat	cytosol	36.18	35.98
TraesCS2B01G492800.1	Wheat	plastid	36.75	35.73
TraesCS2B01G494000.1	Wheat	cytosol	36.18	35.57
TraesCS2B01G494600.1	Wheat	cytosol	37.04	35.23
TraesCS2B01G493100.1	Wheat	cytosol	36.75	35.05
TraesCS5B01G364400.1	Wheat	plastid	36.47	34.97
TraesCS2B01G493500.1	Wheat	cytosol	35.61	34.63
TraesCS2B01G496300.1	Wheat	cytosol	34.76	34.27
TraesCS2B01G496200.1	Wheat	cytosol	33.9	34.0
TraesCS7B01G211000.1	Wheat	cytosol	31.05	33.96
TraesCS2B01G496500.1	Wheat	cytosol	33.33	33.43
TraesCS2B01G159700.1	Wheat	mitochondrion, plastid	40.17	33.18
TraesCS5B01G431400.2	Wheat	cytosol	39.32	31.58
TraesCS2B01G262200.1	Wheat	cytosol	37.61	30.99
TraesCS2B01G493700.2	Wheat	cytosol	34.76	23.69

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379
PANTHER:PTHR26379:SF211	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
EnsemblPlantsGene:TraesCS5B01G042000	EnsemblPlants:TraesCS5B01G042000.1	TIGR:cd00121	TIGR:cd14736	:	:

Description

No Description!

Coordinates

chr5B:-:46151372..46152918

Molecular Weight (calculated)

38857.1 Da

IEP (calculated)

6.782

GRAVY (calculated)

-0.082

Length

351 amino acids

Sequence
(BLAST)

001: MAASETSIVR VPSRCKAETA RGTVAFQIAG YSLHKGLGRG NCLRSPAFSI GGYEWCIHYY PDGSKHEDSE GYVSVFLKLL TKNAEVKALH NVMLVDTARG
101: GSIIMNAYKG TKVFDSKTPS WGVRKFMKNT AEVDSVYLRN DCLIIECEVS VIKETPDIHV PPSDLSGNLA TLLEAKIGAD VTFKVQGEVF SAHKVLLAVR
201: SAVFNAEFYG PMGDKGAHDI TIDDMQPGVF KAFLHFMYTD SMPPMDNLED DDKREMVKHL LVPADRYAME RMKMICEGML CKSLDVETVA TILALADQHH
301: CSKLKDACIE FMLSSNRMND VIASQGYLHL KISSPDVIMD VLERAAKARK I

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.