Factsheet for TraesCS5B01G043200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G042100.1	Wheat	cytosol	32.86	90.55
TraesCS5A01G041400.1	Wheat	plastid	90.29	89.77
TraesCS5D01G048300.1	Wheat	plastid	80.57	79.89
TraesCS5B01G042300.1	Wheat	plastid	74.57	74.36
TraesCS5B01G042000.1	Wheat	cytosol	74.29	74.07
TraesCS6B01G443900.1	Wheat	cytosol	68.29	68.09
TraesCS2B01G384100.1	Wheat	cytosol	34.29	56.6
TraesCS2B01G383700.1	Wheat	mitochondrion	55.71	53.28
TraesCS2B01G383900.1	Wheat	mitochondrion	55.43	52.72
TraesCS2B01G383800.1	Wheat	mitochondrion	52.57	51.54
TraesCS2B01G436900.1	Wheat	peroxisome	22.29	50.65
TraesCS3B01G026400.1	Wheat	cytosol	52.29	50.55
TraesCS3B01G060200.1	Wheat	cytosol	52.0	50.28
TraesCS1B01G111900.1	Wheat	mitochondrion, plastid	49.43	49.71
TraesCS2B01G574000.1	Wheat	cytosol, plastid	35.14	49.4
TraesCS7B01G421900.1	Wheat	cytosol	51.71	49.32
TraesCS7B01G422800.1	Wheat	cytosol, plastid	50.29	47.7
TraesCS3B01G345600.1	Wheat	cytosol, mitochondrion, plastid	48.86	47.11
TraesCS7B01G422200.1	Wheat	cytosol	48.29	47.08
TraesCS7B01G423000.1	Wheat	cytosol, plastid	49.71	46.9
TraesCS3B01G345400.1	Wheat	cytosol	48.86	46.85
TraesCS1B01G387500.1	Wheat	cytosol, plastid	48.0	46.03
TraesCS2B01G573200.1	Wheat	cytosol	42.86	45.32
TraesCS6B01G303100.1	Wheat	cytosol	46.57	44.9
TraesCS3B01G025700.1	Wheat	cytosol	49.14	44.44
TraesCS2B01G573600.1	Wheat	cytosol	41.43	44.34
TraesCS3B01G201600.1	Wheat	cytosol	42.86	43.6
TraesCS7B01G049700.1	Wheat	cytosol	44.29	43.54
TraesCS7B01G422300.1	Wheat	cytosol	45.71	43.48
TraesCS3B01G507600.1	Wheat	cytosol	36.29	43.34
TraesCS7B01G422400.1	Wheat	cytosol	45.14	42.93
TraesCS5B01G472100.1	Wheat	cytosol	43.14	42.78
TraesCS7B01G422500.1	Wheat	cytosol	44.86	42.66
TraesCS5B01G472700.1	Wheat	cytosol	42.86	42.49
TraesCS5B01G460400.1	Wheat	cytosol	43.71	42.15
TraesCS5B01G472500.1	Wheat	cytosol	42.29	41.93
TraesCS2B01G074000.1	Wheat	cytosol	40.86	41.81
TraesCS2B01G573800.1	Wheat	plastid	32.57	41.16
TraesCS5B01G460600.1	Wheat	cytosol	42.0	41.06
TraesCS5B01G460300.1	Wheat	cytosol	42.57	41.05
TraesCS5B01G472600.1	Wheat	cytosol	41.43	40.62
TraesCS5B01G472400.1	Wheat	cytosol	32.0	40.43
TraesCS4B01G122200.1	Wheat	cytosol	41.14	39.24
TraesCS7B01G211100.1	Wheat	cytosol, plastid	39.14	37.53
TraesCS4B01G360400.1	Wheat	cytosol	37.14	36.62
TraesCS4B01G360000.1	Wheat	cytosol	36.0	35.2
TraesCS7B01G211200.1	Wheat	cytosol, mitochondrion	38.86	35.14
TraesCS2B01G494000.1	Wheat	cytosol	35.43	34.73
TraesCS2B01G492800.1	Wheat	plastid	35.71	34.63
TraesCS2B01G495400.1	Wheat	cytosol	36.0	34.62
TraesCS2B01G493500.1	Wheat	cytosol	35.43	34.35
TraesCS2B01G493600.1	Wheat	cytosol	35.43	34.35
TraesCS2B01G496400.1	Wheat	cytosol	34.29	33.99
TraesCS2B01G494600.1	Wheat	cytosol	35.43	33.6
TraesCS2B01G496300.1	Wheat	cytosol	34.0	33.43
TraesCS4B01G392200.1	Wheat	cytosol	34.29	33.43
TraesCS2B01G493100.1	Wheat	cytosol	34.86	33.15
TraesCS5B01G364400.1	Wheat	plastid	34.29	32.79
TraesCS2B01G159700.1	Wheat	mitochondrion, plastid	39.43	32.47
TraesCS2B01G496200.1	Wheat	cytosol	32.29	32.29
TraesCS2B01G262200.1	Wheat	cytosol	39.14	32.16
TraesCS7B01G211000.1	Wheat	cytosol	29.43	32.09
TraesCS5B01G431400.2	Wheat	cytosol	39.71	31.81
TraesCS2B01G496500.1	Wheat	cytosol	30.86	30.86
TraesCS2B01G493700.2	Wheat	cytosol	32.57	22.14

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379
PANTHER:PTHR26379:SF211	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695
InterPro:TRAF-like	EnsemblPlantsGene:TraesCS5B01G043200	EnsemblPlants:TraesCS5B01G043200.1	TIGR:cd00121	TIGR:cd14736	SEG:seg

Description

No Description!

Coordinates

chr5B:+:48146395..48147447

Molecular Weight (calculated)

38909.2 Da

IEP (calculated)

6.314

GRAVY (calculated)

-0.017

Length

350 amino acids

Sequence
(BLAST)

001: MAAPQSSIAM VPSRCTAEMH TATVAVEISG YSRLKGLGRG KYLRSPAFLI GGYEWCIYYF PDGSPDEASE GHVSVFLKLL TKNAEVKALH EWMRLNRVSG
101: QSIVALSRKG PDVFERKKSW GVPKFMQTTA EVESAYLQND CLLIECKVSV ITEILSIYVP PSDILDNIAT LLEGKIGGDV TFKVQGEVFS AHKILLAMRS
201: AVFNAEFYGP LGDKGVQDII INDMQPAVFK AFLHFIYTDS LPSMDDLDDD DKREMVKHLL VAADKYAMER MKRVCEGMLC KCLDVETVAT ILALADQHHC
301: SNLKDACTEF MFSSNRLNDV IASQGYVQLK RSSPDIIVDV LERAAKSRKI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.