Factsheet for TraesCS5A01G041400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G043200.1	Wheat	plastid	89.77	90.29
TraesCS2A01G508000.1	Wheat	cytosol	33.52	84.29
TraesCS5A01G040900.1	Wheat	cytosol	52.84	82.67
TraesCS5A01G041300.1	Wheat	cytosol	81.82	81.82
TraesCS5D01G048300.1	Wheat	plastid	80.68	80.45
TraesCS5A01G040800.1	Wheat	cytosol	78.69	79.37
TraesCS6A01G401700.1	Wheat	cytosol, mitochondrion, plastid	71.88	72.08
TraesCS5A01G041000.1	Wheat	cytosol, mitochondrion, plastid	73.58	64.11
TraesCS5A01G452100.1	Wheat	cytosol	21.88	59.23
TraesCS7A01G511200.1	Wheat	cytosol	25.85	58.71
TraesCS4A01G462500.1	Wheat	mitochondrion	57.1	56.46
TraesCS7A01G026200.1	Wheat	mitochondrion	51.14	55.38
TraesCS3A01G019700.1	Wheat	cytosol	56.25	54.7
TraesCS1A01G101100.1	Wheat	mitochondrion, plastid	53.12	53.74
TraesCS5A01G462000.1	Wheat	cytosol	26.7	53.71
TraesCS2A01G458500.1	Wheat	cytosol	20.17	53.38
TraesCS3A01G020800.1	Wheat	cytosol	53.98	53.37
TraesCS2A01G458700.1	Wheat	cytosol	21.88	52.74
TraesCS3A01G020200.1	Wheat	cytosol	53.12	52.23
TraesCS2A01G366500.1	Wheat	cytosol	51.99	51.12
TraesCS7A01G511000.1	Wheat	mitochondrion, plastid	35.8	51.01
TraesCS3A01G320300.1	Wheat	cytosol	50.57	50.14
TraesCS3A01G164400.1	Wheat	cytosol	34.66	49.39
TraesCS2A01G543300.1	Wheat	cytosol	46.31	48.66
TraesCS7A01G511400.1	Wheat	cytosol	49.43	47.93
TraesCS7A01G311400.1	Wheat	cytosol	24.72	47.8
TraesCS6A01G275800.1	Wheat	cytosol	48.86	46.24
TraesCS7A01G511500.1	Wheat	cytosol	48.3	46.2
TraesCS1A01G368600.1	Wheat	mitochondrion	44.6	45.11
TraesCS4A01G193000.1	Wheat	cytosol	44.03	42.82
TraesCS5A01G451900.1	Wheat	cytosol	42.9	42.06
TraesCS2A01G418000.1	Wheat	cytosol	43.75	41.96
TraesCS5A01G451500.1	Wheat	cytosol	43.18	41.87
TraesCS2A01G217100.1	Wheat	cytosol	42.61	41.67
TraesCS5A01G451600.1	Wheat	cytosol	41.19	41.55
TraesCS5A01G461800.1	Wheat	cytosol	39.77	41.42
TraesCS3A01G212400.1	Wheat	cytosol	40.06	40.99
TraesCS2A01G418100.1	Wheat	cytosol	42.05	40.22
TraesCS7A01G550800.1	Wheat	cytosol	30.4	39.34
TraesCS5A01G528500.1	Wheat	cytosol	35.23	39.12
TraesCS2A01G472600.1	Wheat	cytosol	37.22	38.53
TraesCS4A01G465700.1	Wheat	cytosol	38.64	37.99
TraesCS5A01G528600.1	Wheat	cytosol	38.35	37.92
TraesCS4A01G465200.1	Wheat	cytosol	36.08	37.69
TraesCS2A01G470700.1	Wheat	cytosol, plastid	39.2	37.2
TraesCS6A01G167500.1	Wheat	plastid	35.23	37.13
TraesCS2A01G470000.1	Wheat	plastid	37.22	36.69
TraesCS2A01G470900.1	Wheat	cytosol	37.22	36.39
TraesCS2A01G471000.1	Wheat	cytosol	24.43	36.13
TraesCS2A01G470400.1	Wheat	cytosol	36.93	36.01
TraesCS2A01G472700.1	Wheat	cytosol	36.93	35.71
TraesCS2A01G473400.1	Wheat	cytosol	31.25	34.92
TraesCS2A01G473500.1	Wheat	cytosol	34.66	34.86
TraesCS5A01G554900.1	Wheat	cytosol	35.23	34.54
TraesCS2A01G473300.1	Wheat	cytosol	28.12	33.45
TraesCS2A01G543600.1	Wheat	plastid	25.28	33.21
TraesCS2A01G255800.1	Wheat	cytosol	36.36	32.32
TraesCS5A01G361900.1	Wheat	cytosol	32.67	32.03
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	38.35	31.76
TraesCS5A01G429400.2	Wheat	cytosol	39.2	31.58
TraesCS2A01G237800.1	Wheat	cytosol	37.78	31.22
TraesCS2A01G471800.1	Wheat	mitochondrion	34.94	27.21
TraesCS2A01G471700.1	Wheat	cytosol	31.82	26.73

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379
PANTHER:PTHR26379:SF211	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695
InterPro:TRAF-like	EnsemblPlantsGene:TraesCS5A01G041400	EnsemblPlants:TraesCS5A01G041400.1	TIGR:cd00121	TIGR:cd14736	SEG:seg

Description

No Description!

Coordinates

chr5A:-:37401198..37402256

Molecular Weight (calculated)

39114.2 Da

IEP (calculated)

6.434

GRAVY (calculated)

-0.111

Length

352 amino acids

Sequence
(BLAST)

001: MAASQSSIAM VPSRCTAEMH TARATVAVEI SGYSRLKGLG RGKYLRSPAF SIGGHEWCIY YFPDGSPDEA SQGHVSVFLK LLTKNAEVKA LHMWMRLNRV
101: SGQSIVALSR KGPDVFERKK SWGVPKFMQT TAEVESAYLQ NDCLLIECEV SVIKETLDIH VPPSDLSDNL ATLLNGKIGA DVTFKVQGEV FSAHKILLAM
201: RSAVFNAEFY GPMGDNGAQD ITIDDMQPAV FKAFLHFIYT DSLPSMDDLD DDDKREMVKH LLVAGDKYAM ERMKRVCEGM LCKSLDVETV ATILALADQH
301: HCNNLKDACI EFMLSSNRMD DVIASQGYAH LKRSCPDLIV DVFERTVKSR KI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.