Factsheet for TraesCS2A01G543300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G573200.1	Wheat	cytosol	86.27	87.31
TraesCS2D01G544500.1	Wheat	cytosol, plastid	74.33	83.84
TraesCS2D01G544900.1	Wheat	plastid	68.06	81.43
TraesCS2A01G543600.1	Wheat	plastid	51.64	64.55
TraesCS5A01G462000.1	Wheat	cytosol	27.46	52.57
TraesCS5A01G040900.1	Wheat	cytosol	34.33	51.11
TraesCS7A01G026200.1	Wheat	mitochondrion	49.25	50.77
TraesCS4A01G462500.1	Wheat	mitochondrion	53.13	50.0
TraesCS1A01G101100.1	Wheat	mitochondrion, plastid	50.75	48.85
TraesCS3A01G019700.1	Wheat	cytosol	51.64	47.79
TraesCS2A01G508000.1	Wheat	cytosol	19.7	47.14
TraesCS3A01G020200.1	Wheat	cytosol	50.15	46.93
TraesCS5A01G452100.1	Wheat	cytosol	18.21	46.92
TraesCS2A01G366500.1	Wheat	cytosol	49.85	46.65
TraesCS5A01G041400.1	Wheat	plastid	48.66	46.31
TraesCS3A01G020800.1	Wheat	cytosol	48.96	46.07
TraesCS5A01G040800.1	Wheat	cytosol	47.76	45.85
TraesCS7A01G511400.1	Wheat	cytosol	49.25	45.45
TraesCS6A01G275800.1	Wheat	cytosol	50.45	45.43
TraesCS5A01G451900.1	Wheat	cytosol	48.66	45.4
TraesCS3A01G164400.1	Wheat	cytosol	33.43	45.34
TraesCS5A01G041300.1	Wheat	cytosol	47.46	45.17
TraesCS6A01G401700.1	Wheat	cytosol, mitochondrion, plastid	46.87	44.73
TraesCS5A01G451500.1	Wheat	cytosol	48.36	44.63
TraesCS5A01G461800.1	Wheat	cytosol	44.78	44.38
TraesCS4A01G193000.1	Wheat	cytosol	47.16	43.65
TraesCS2A01G458500.1	Wheat	cytosol	17.31	43.61
TraesCS3A01G320300.1	Wheat	cytosol	45.97	43.38
TraesCS5A01G451600.1	Wheat	cytosol	45.07	43.27
TraesCS2A01G458700.1	Wheat	cytosol	18.81	43.15
TraesCS7A01G511200.1	Wheat	cytosol	19.7	42.58
TraesCS7A01G511500.1	Wheat	cytosol	46.57	42.39
TraesCS3A01G212400.1	Wheat	cytosol	43.28	42.15
TraesCS5A01G041000.1	Wheat	cytosol, mitochondrion, plastid	50.45	41.83
TraesCS6A01G167500.1	Wheat	plastid	41.19	41.32
TraesCS1A01G368600.1	Wheat	mitochondrion	42.69	41.09
TraesCS2A01G418100.1	Wheat	cytosol	45.07	41.03
TraesCS2A01G418000.1	Wheat	cytosol	44.78	40.87
TraesCS2A01G217100.1	Wheat	cytosol	43.28	40.28
TraesCS7A01G511000.1	Wheat	mitochondrion, plastid	28.96	39.27
TraesCS2A01G472600.1	Wheat	cytosol	39.4	38.82
TraesCS5A01G528500.1	Wheat	cytosol	36.72	38.8
TraesCS7A01G311400.1	Wheat	cytosol	20.6	37.91
TraesCS2A01G471000.1	Wheat	cytosol	26.87	37.82
TraesCS2A01G473400.1	Wheat	cytosol	34.93	37.14
TraesCS7A01G550800.1	Wheat	cytosol	29.85	36.76
TraesCS5A01G528600.1	Wheat	cytosol	38.81	36.52
TraesCS4A01G465200.1	Wheat	cytosol	36.12	35.91
TraesCS2A01G472700.1	Wheat	cytosol	38.81	35.71
TraesCS4A01G465700.1	Wheat	cytosol	37.91	35.47
TraesCS2A01G473300.1	Wheat	cytosol	31.04	35.14
TraesCS2A01G470900.1	Wheat	cytosol	37.01	34.44
TraesCS2A01G470400.1	Wheat	cytosol	36.72	34.07
TraesCS5A01G554900.1	Wheat	cytosol	36.42	33.98
TraesCS2A01G470000.1	Wheat	plastid	35.22	33.05
TraesCS2A01G470700.1	Wheat	cytosol, plastid	36.12	32.61
TraesCS2A01G473500.1	Wheat	cytosol	34.03	32.57
TraesCS2A01G255800.1	Wheat	cytosol	37.91	32.07
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	40.3	31.76
TraesCS5A01G361900.1	Wheat	cytosol	34.03	31.75
TraesCS2A01G237800.1	Wheat	cytosol	38.51	30.28
TraesCS5A01G429400.2	Wheat	cytosol	37.01	28.38
TraesCS2A01G471800.1	Wheat	mitochondrion	35.52	26.33
TraesCS2A01G471700.1	Wheat	cytosol	32.54	26.01

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS2A01G543300
EnsemblPlants:TraesCS2A01G543300.1	TIGR:cd00121	TIGR:cd14736	SEG:seg	:	:

Description

No Description!

Coordinates

chr2A:-:753404086..753405093

Molecular Weight (calculated)

37123.0 Da

IEP (calculated)

7.653

GRAVY (calculated)

0.026

Length

335 amino acids

Sequence
(BLAST)

001: MAAPQRPTTT TTASACIPDT ARGTHVFTLA GYRLHKGIGV GNFIRSATFA VGGYAWCIRY YPDGFSSEYK DSVSVCVELQ SKNSVVRALY DLRLTSRATG
101: LSSLIFSRPS SFPAFDSCKN DNFRGAYTFM KRDLLEASPY LQDDCIVIQC DVTVLLKKIP AVALATTTTK TSDIQVPPSD LLNNLAMLLE GKKGADVVIK
201: VGGETYHAHK IVLAMRSPVF DAELYGPMAM WDKEKQCIQI VDMQPAVFRA LLHFIYTDSL PAMDDLLDSH DKREMMRHLL VAADRYAMDR LKLMCEAILC
301: KGLDAESVAA TLALADQHRC SKLRDACIEY IKLFT

Best Arabidopsis Sequence Match ( AT2G39760.2 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGGT GCI

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.