Factsheet for TraesCS2D01G544500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G573200.1	Wheat	cytosol	85.19	76.44
TraesCS2A01G543300.1	Wheat	cytosol	83.84	74.33
TraesCS2D01G544900.1	Wheat	plastid	66.67	70.71
TraesCS2D01G544700.1	Wheat	cytosol	73.74	67.38
TraesCS2D01G363000.1	Wheat	mitochondrion	56.23	45.63
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	53.2	45.4
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	52.86	45.24
TraesCS3D01G026900.1	Wheat	cytosol	55.22	45.18
TraesCS5D01G048000.1	Wheat	cytosol	51.18	44.31
TraesCS5D01G047900.1	Wheat	cytosol	20.88	44.29
TraesCS2D01G059700.1	Wheat	cytosol	20.2	44.12
TraesCS2D01G363600.1	Wheat	cytosol	52.86	43.37
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	22.56	43.23
TraesCS7D01G024000.1	Wheat	mitochondrion	51.85	43.14
TraesCS5D01G462100.1	Wheat	cytosol	51.18	42.46
TraesCS5D01G048300.1	Wheat	plastid	49.83	41.93
TraesCS7D01G501100.1	Wheat	plastid	41.08	41.92
TraesCS7D01G501200.1	Wheat	cytosol	52.19	41.78
TraesCS3D01G177000.1	Wheat	cytosol	47.81	41.28
TraesCS3D01G352200.1	Wheat	cytosol	40.74	41.02
TraesCS5D01G461700.1	Wheat	cytosol	49.49	40.5
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	47.14	40.23
TraesCS7D01G148800.1	Wheat	cytosol	48.15	40.17
TraesCS6D01G256000.1	Wheat	cytosol	51.52	39.74
TraesCS2D01G059500.1	Wheat	cytosol	47.81	39.66
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	31.31	39.24
TraesCS2D01G458900.1	Wheat	extracellular	19.53	39.19
TraesCS2D01G415300.1	Wheat	cytosol	48.82	39.19
TraesCS5D01G474700.1	Wheat	cytosol	30.64	39.06
TraesCS7D01G500400.1	Wheat	cytosol	48.15	38.96
TraesCS6D01G156500.1	Wheat	plastid	43.77	38.92
TraesCS3D01G310900.1	Wheat	cytosol	36.7	38.25
TraesCS3D01G026500.1	Wheat	mitochondrion	47.47	36.62
TraesCS2D01G472200.1	Wheat	cytosol	41.08	35.88
TraesCS5D01G370700.1	Wheat	cytosol	33.33	35.61
TraesCS7D01G308000.1	Wheat	cytosol	42.76	35.57
TraesCS3D01G214900.1	Wheat	cytosol	29.63	35.34
TraesCS7D01G537000.1	Wheat	cytosol	33.0	34.75
TraesCS5D01G047800.1	Wheat	peroxisome	43.77	34.67
TraesCS7D01G307900.1	Wheat	cytosol, plastid	42.09	34.15
TraesCS2D01G472400.1	Wheat	cytosol	41.41	33.79
TraesCS4D01G197600.1	Wheat	cytosol	38.72	32.76
TraesCS7D01G307800.1	Wheat	cytosol	35.35	32.71
TraesCS3D01G513100.1	Wheat	cytosol, plastid	38.38	32.29
TraesCS4D01G353300.1	Wheat	cytosol	38.38	31.84
TraesCS2D01G469800.1	Wheat	plastid	36.03	29.97
TraesCS2D01G470700.1	Wheat	cytosol	36.36	29.92
TraesCS2D01G472300.1	Wheat	cytosol	37.71	29.71
TraesCS2D01G266900.1	Wheat	cytosol	39.39	29.55
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	41.41	28.94
TraesCS2D01G246900.1	Wheat	cytosol, plastid	40.4	28.17
TraesCS2D01G471800.1	Wheat	cytosol	38.72	27.84
TraesCS5D01G437400.1	Wheat	cytosol	39.06	25.16
TraesCS2D01G471700.1	Wheat	cytosol	33.67	24.04

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS2D01G544500
EnsemblPlants:TraesCS2D01G544500.1	TIGR:cd00121	TIGR:cd14736	:	:	:

Description

No Description!

Coordinates

chr2D:-:621588560..621590175

Molecular Weight (calculated)

32738.7 Da

IEP (calculated)

6.232

GRAVY (calculated)

0.039

Length

297 amino acids

Sequence
(BLAST)

001: MAAPQRPTSA TTASVCVPDT ARGTHVFTVA GYRLHKGLGV GNFIRSATFA VGGYDWCIRY YPDGDANKDY ISICVELQSK ESVNSHVKGQ SIFMQRDLLE
101: ASPYLKDDCI VIESDVTVLL KKIPAVATAT TKTPEIEVPP SDLSNNLAKL LEGKKGADLM INVSGETFHA HKIVLAMRSP VFEAELYGPM AMCGTEKQCI
201: EIVDMQPAVF GAFLHFIYTD SLPAMDDLLD RHDKREVIRH LLVAADRYAM DRLKLMCEAI LCKGLDAESV VATLALADQH RCSKLRDACI EYIKLFC

Best Arabidopsis Sequence Match ( AT2G39760.2 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGGT GCI

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.