Factsheet for TraesCS4D01G197600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G471000.1	Wheat	cytosol	37.32	55.04
EES11455	Sorghum	cytosol	41.03	44.44
TraesCS2D01G469800.1	Wheat	plastid	41.88	41.18
TraesCS2D01G472200.1	Wheat	cytosol	39.6	40.88
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	17.66	40.0
TraesCS2D01G470700.1	Wheat	cytosol	40.74	39.61
TraesCS5D01G370700.1	Wheat	cytosol	31.34	39.57
TraesCS2D01G544500.1	Wheat	cytosol, plastid	32.76	38.72
TraesCS4D01G353300.1	Wheat	cytosol	39.32	38.55
TraesCS2D01G472400.1	Wheat	cytosol	39.32	37.91
TraesCS3D01G513100.1	Wheat	cytosol, plastid	37.61	37.39
TraesCS2B01G493700.2	Wheat	cytosol	54.7	37.28
TraesCS5D01G047900.1	Wheat	cytosol	14.24	35.71
TraesCS2D01G544700.1	Wheat	cytosol	33.05	35.69
TraesCS2D01G059700.1	Wheat	cytosol	13.68	35.29
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	23.65	35.02
TraesCS2D01G472300.1	Wheat	cytosol	37.61	35.01
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	33.9	34.29
TraesCS7D01G308000.1	Wheat	cytosol	34.76	34.17
TraesCS2D01G363600.1	Wheat	cytosol	35.04	33.98
TraesCS7D01G024000.1	Wheat	mitochondrion	34.47	33.89
TraesCS2D01G059500.1	Wheat	cytosol	34.47	33.8
TraesCS3D01G026900.1	Wheat	cytosol	34.76	33.61
TraesCS2D01G363000.1	Wheat	mitochondrion	35.04	33.61
TraesCS2D01G544900.1	Wheat	plastid	26.78	33.57
TraesCS5D01G048000.1	Wheat	cytosol	32.76	33.53
TraesCS5D01G462100.1	Wheat	cytosol	34.19	33.52
TraesCS5D01G048300.1	Wheat	plastid	33.62	33.43
TraesCS7D01G307900.1	Wheat	cytosol, plastid	34.47	33.06
TraesCS2D01G415300.1	Wheat	cytosol	34.76	32.97
TraesCS3D01G177000.1	Wheat	cytosol	32.19	32.85
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	32.48	32.76
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	32.48	32.76
TraesCS6D01G156500.1	Wheat	plastid	31.05	32.63
TraesCS7D01G148800.1	Wheat	cytosol	32.76	32.3
TraesCS6D01G256000.1	Wheat	cytosol	35.04	31.95
TraesCS2D01G471800.1	Wheat	cytosol	37.32	31.72
TraesCS5D01G461700.1	Wheat	cytosol	32.76	31.68
TraesCS7D01G501200.1	Wheat	cytosol	33.33	31.54
TraesCS3D01G352200.1	Wheat	cytosol	26.5	31.53
TraesCS5D01G474700.1	Wheat	cytosol	20.8	31.33
TraesCS2D01G458900.1	Wheat	extracellular	13.11	31.08
TraesCS7D01G500400.1	Wheat	cytosol	31.91	30.52
TraesCS7D01G501100.1	Wheat	plastid	25.07	30.24
TraesCS7D01G537000.1	Wheat	cytosol	24.22	30.14
TraesCS2D01G266900.1	Wheat	cytosol	33.05	29.29
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	35.33	29.18
TraesCS3D01G026500.1	Wheat	mitochondrion	31.62	28.83
TraesCS3D01G310900.1	Wheat	cytosol	23.36	28.77
TraesCS2D01G471700.1	Wheat	cytosol	33.9	28.61
TraesCS5D01G047800.1	Wheat	peroxisome	30.48	28.53
TraesCS3D01G214900.1	Wheat	cytosol	19.37	27.31
TraesCS7D01G307800.1	Wheat	cytosol	24.5	26.79
TraesCS2D01G246900.1	Wheat	cytosol, plastid	30.2	24.88
TraesCS5D01G437400.1	Wheat	cytosol	29.63	22.56

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF224
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS4D01G197600
EnsemblPlants:TraesCS4D01G197600.1	TIGR:cd00121	TIGR:cd14736	SEG:seg	:	:

Description

No Description!

Coordinates

chr4D:-:342912589..342914166

Molecular Weight (calculated)

37849.4 Da

IEP (calculated)

6.422

GRAVY (calculated)

0.030

Length

351 amino acids

Sequence
(BLAST)

001: MAAMDQPHTS SRCVVQTASA THDFVIANYS LIRYLPPGEA VSSGIFSVGG YEWTIMFYPG GTLYYTDTQP GYAPACVKSP PGCASACVKI CNGATGVPAS
101: FSLGFLNRYG EALPATCATA VFRASPSDRS GFLDVGRTLD LASPWYLNDD CLTIRCVLAV IFEHTENTKI GPAALVPRPD LPSHLKCMLT DGKGTDVTFD
201: VGGRSFPAHR CLLAARSPVF NAELFGPMRE KDMKIIKIND MEPAIFELLI HFVYMDSLPN DGEDCSTAVT QHLLVAADRY GLARLKQMCD AKLRASLNTE
301: TVAATLALAE QHHCPLLREA CEAFKSSSEV MAHVVASDGR QIQGSGGLQH R

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.