Factsheet for TraesCS3D01G310900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G345400.1	Wheat	cytosol	91.23	71.23
TraesCS3A01G320300.1	Wheat	cytosol	87.72	70.42
TraesCS3B01G345600.1	Wheat	cytosol, mitochondrion, plastid	87.72	68.87
TraesCS7D01G501100.1	Wheat	plastid	48.77	47.77
TraesCS7D01G500400.1	Wheat	cytosol	60.0	46.59
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	32.28	38.82
TraesCS2D01G544700.1	Wheat	cytosol	43.16	37.85
TraesCS3D01G214900.1	Wheat	cytosol	32.98	37.75
TraesCS7D01G501200.1	Wheat	cytosol	48.77	37.47
TraesCS2D01G544500.1	Wheat	cytosol, plastid	38.25	36.7
TraesCS5D01G474700.1	Wheat	cytosol	29.82	36.48
TraesCS2D01G363000.1	Wheat	mitochondrion	45.96	35.79
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	43.51	35.63
TraesCS7D01G024000.1	Wheat	mitochondrion	43.51	34.73
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	42.11	34.58
TraesCS3D01G026900.1	Wheat	cytosol	43.16	33.88
TraesCS2D01G363600.1	Wheat	cytosol	42.11	33.15
TraesCS5D01G048300.1	Wheat	plastid	41.05	33.14
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	40.35	33.05
TraesCS5D01G048000.1	Wheat	cytosol	39.65	32.94
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	17.54	32.26
TraesCS2D01G059500.1	Wheat	cytosol	39.3	31.28
TraesCS5D01G462100.1	Wheat	cytosol	39.3	31.28
TraesCS5D01G461700.1	Wheat	cytosol	39.65	31.13
TraesCS3D01G352200.1	Wheat	cytosol	31.93	30.85
TraesCS3D01G177000.1	Wheat	cytosol	36.49	30.23
TraesCS2D01G415300.1	Wheat	cytosol	38.95	30.0
TraesCS3D01G026500.1	Wheat	mitochondrion	39.65	29.35
TraesCS2D01G544900.1	Wheat	plastid	28.77	29.29
TraesCS7D01G148800.1	Wheat	cytosol	36.49	29.21
TraesCS5D01G370700.1	Wheat	cytosol	27.72	28.42
TraesCS6D01G256000.1	Wheat	cytosol	38.25	28.31
TraesCS7D01G307800.1	Wheat	cytosol	31.23	27.73
TraesCS6D01G156500.1	Wheat	plastid	32.28	27.54
TraesCS5D01G047800.1	Wheat	peroxisome	36.14	27.47
TraesCS7D01G307900.1	Wheat	cytosol, plastid	34.74	27.05
TraesCS7D01G308000.1	Wheat	cytosol	32.98	26.33
TraesCS7D01G537000.1	Wheat	cytosol	25.96	26.24
TraesCS2D01G472200.1	Wheat	cytosol	31.23	26.18
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	37.19	24.94
TraesCS2D01G472300.1	Wheat	cytosol	32.28	24.4
TraesCS2D01G469800.1	Wheat	plastid	30.18	24.09
TraesCS3D01G513100.1	Wheat	cytosol, plastid	29.82	24.08
TraesCS4D01G353300.1	Wheat	cytosol	30.18	24.02
TraesCS2D01G266900.1	Wheat	cytosol	33.33	23.99
TraesCS2D01G472400.1	Wheat	cytosol	30.53	23.9
TraesCS4D01G197600.1	Wheat	cytosol	28.77	23.36
TraesCS2D01G246900.1	Wheat	cytosol, plastid	34.04	22.77
TraesCS2D01G470700.1	Wheat	cytosol	27.72	21.88
TraesCS5D01G437400.1	Wheat	cytosol	34.74	21.48
TraesCS2D01G059700.1	Wheat	cytosol	10.18	21.32
TraesCS5D01G047900.1	Wheat	cytosol	10.18	20.71
TraesCS2D01G471800.1	Wheat	cytosol	29.47	20.34
TraesCS2D01G471700.1	Wheat	cytosol	28.77	19.71
TraesCS2D01G458900.1	Wheat	extracellular	7.72	14.86

Protein Annotations

Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	PFAM:PF00651
PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061
SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS3D01G310900	EnsemblPlants:TraesCS3D01G310900.1
TIGR:cd00121	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:425151414..425152271

Molecular Weight (calculated)

32273.1 Da

IEP (calculated)

4.697

GRAVY (calculated)

-0.283

Length

285 amino acids

Sequence
(BLAST)

001: MSASRIPPRT MSASACAPET AQGTHLFKID GYSLCRGLGV GKSIQSATFR VGGHDWCVYF YPDGLREDSK DYVSVFVELK TENAEARALY HVRVVDQAWP
101: PPPFTWPVPS QYEALVFNSA DDYNCCSGYT HFMRRTELQP YVLEDTLILE CNLAVIELKD AQEADVKVNF EAQAPPSELV HNLSSLLEAT EGSDVSFTVK
201: EEIFPAHKVI LAMRSPVFRV KFYGPMRDES SRSITVEDMQ PAVFRGLLHF IYTDSLPPLD YLDDDEYEEM ARHLRWPQIG TPWKG

Best Arabidopsis Sequence Match ( AT2G39760.2 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGGT GCI

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.