Factsheet for TraesCS3D01G513100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G465700.1	Wheat	cytosol	77.05	75.98
TraesCS5A01G528600.1	Wheat	cytosol	75.92	75.28
TraesCS4B01G360400.1	Wheat	cytosol	75.07	74.65
TraesCS5A01G528500.1	Wheat	cytosol	66.57	74.13
TraesCS5D01G370700.1	Wheat	cytosol	57.79	73.38
TraesCS4A01G465200.1	Wheat	cytosol	69.69	73.0
TraesCS4D01G353300.1	Wheat	cytosol	71.67	70.67
TraesCS2D01G472200.1	Wheat	cytosol	56.09	58.24
TraesCS2D01G472300.1	Wheat	cytosol	60.91	57.03
OQU82372	Sorghum	plastid	52.97	54.84
OQU82373	Sorghum	cytosol, plastid	52.41	54.57
Os04t0625500-00	Rice	plastid	54.96	51.73
TraesCS2D01G470700.1	Wheat	cytosol	51.27	50.14
TraesCS2D01G472400.1	Wheat	cytosol	50.42	48.9
TraesCS2D01G469800.1	Wheat	plastid	49.01	48.46
Os04t0625400-00	Rice	plastid	44.48	47.58
TraesCS2D01G471700.1	Wheat	cytosol	54.39	46.15
TraesCS2D01G471800.1	Wheat	cytosol	53.54	45.76
TraesCS2D01G059700.1	Wheat	cytosol	17.56	45.59
EES11459	Sorghum	plastid	47.31	43.83
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	17.85	40.65
TraesCS2D01G363000.1	Wheat	mitochondrion	41.36	39.89
TraesCS5D01G047900.1	Wheat	cytosol	15.58	39.29
TraesCS7D01G024000.1	Wheat	mitochondrion	39.38	38.94
TraesCS2D01G059500.1	Wheat	cytosol	39.38	38.83
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	37.96	38.62
TraesCS2D01G544500.1	Wheat	cytosol, plastid	32.29	38.38
TraesCS7D01G308000.1	Wheat	cytosol	38.53	38.1
TraesCS2D01G363600.1	Wheat	cytosol	38.81	37.85
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	37.11	37.64
TraesCS3D01G352200.1	Wheat	cytosol	31.44	37.63
TraesCS4D01G197600.1	Wheat	cytosol	37.39	37.61
TraesCS2D01G544700.1	Wheat	cytosol	34.56	37.54
TraesCS7D01G500400.1	Wheat	cytosol	38.81	37.33
TraesCS3D01G026900.1	Wheat	cytosol	38.24	37.19
TraesCS2D01G458900.1	Wheat	extracellular	15.58	37.16
TraesCS7D01G148800.1	Wheat	cytosol	37.11	36.8
TraesCS5D01G461700.1	Wheat	cytosol	37.68	36.64
TraesCS3D01G177000.1	Wheat	cytosol	35.69	36.63
TraesCS5D01G462100.1	Wheat	cytosol	37.11	36.59
TraesCS6D01G256000.1	Wheat	cytosol	39.66	36.36
TraesCS7D01G501200.1	Wheat	cytosol	37.96	36.12
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	35.41	35.92
TraesCS5D01G048000.1	Wheat	cytosol	34.84	35.86
TraesCS5D01G048300.1	Wheat	plastid	35.41	35.41
TraesCS3D01G214900.1	Wheat	cytosol	24.93	35.34
TraesCS7D01G537000.1	Wheat	cytosol	27.76	34.75
TraesCS6D01G156500.1	Wheat	plastid	32.86	34.73
TraesCS2D01G544900.1	Wheat	plastid	27.48	34.64
TraesCS7D01G307900.1	Wheat	cytosol, plastid	35.41	34.15
TraesCS2D01G415300.1	Wheat	cytosol	35.41	33.78
TraesCS2D01G266900.1	Wheat	cytosol	37.68	33.59
TraesCS7D01G501100.1	Wheat	plastid	27.2	32.99
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	39.38	32.71
TraesCS5D01G474700.1	Wheat	cytosol	21.25	32.19
TraesCS2D01G246900.1	Wheat	cytosol, plastid	38.53	31.92
TraesCS5D01G047800.1	Wheat	peroxisome	33.43	31.47
TraesCS3D01G026500.1	Wheat	mitochondrion	33.14	30.39
TraesCS7D01G307800.1	Wheat	cytosol	27.48	30.22
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	20.11	29.96
TraesCS3D01G310900.1	Wheat	cytosol	24.08	29.82
TraesCS5D01G437400.1	Wheat	cytosol	37.39	28.63

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379
PANTHER:PTHR26379:SF224	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695
InterPro:TRAF-like	EnsemblPlantsGene:TraesCS3D01G513100	EnsemblPlants:TraesCS3D01G513100.1	TIGR:cd00121	TIGR:cd14736	SEG:seg

Description

No Description!

Coordinates

chr3D:+:597397999..597399345

Molecular Weight (calculated)

39091.0 Da

IEP (calculated)

6.344

GRAVY (calculated)

-0.002

Length

353 amino acids

Sequence
(BLAST)

001: MANNSTSSVN TSISESSSRC LTECVTTAHN FEVIRFSKLE GMGAGKFISS STFSVSGYDW NIRVYPDEWK EEDKAAHLSV FLCFCSGATG VKVEYTLSLL
101: EKDGRISQIA SIPNTFWTVG GYWGRDKFIE KSKLKELLSR NGDCFTIRCV LTVMKEPRTE DLGTVIVPVP QSDMHTHFAS MLKDGEGVDV TFSVGGQLFN
201: AHRCVLAARS SVFKAVLFGK MKETTMKSIE IDDMEPAIFE ALLHFIYTDS LSCDVDQIVA LQHLFVAADR YGMDRLKAIC EGKLCQRIDV QTVAITLTLA
301: EQHDAVHLKN ACLRFLSSQG VLRAVKETDG FKHLTTSCPS IMMDILDKVA PPS

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.