Factsheet for TraesCS3D01G177000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G201600.1	Wheat	cytosol	95.64	95.64
TraesCS3A01G164400.1	Wheat	cytosol	65.41	91.09
TraesCS2D01G458900.1	Wheat	extracellular	26.74	62.16
TraesCS2D01G415300.1	Wheat	cytosol	65.41	60.81
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	38.95	56.54
TraesCS2D01G059700.1	Wheat	cytosol	22.09	55.88
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	25.0	55.48
TraesCS5D01G047900.1	Wheat	cytosol	20.64	50.71
TraesCS3D01G352200.1	Wheat	cytosol	41.86	48.81
TraesCS2D01G363000.1	Wheat	mitochondrion	51.16	48.09
TraesCS2D01G544500.1	Wheat	cytosol, plastid	41.28	47.81
OQU80115	Sorghum	cytosol	47.97	47.14
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	47.09	46.55
TraesCS5D01G462100.1	Wheat	cytosol	48.26	46.37
TraesCS3D01G026900.1	Wheat	cytosol	48.55	46.01
TraesCS5D01G461700.1	Wheat	cytosol	47.97	45.45
TraesCS7D01G024000.1	Wheat	mitochondrion	46.8	45.1
TraesCS7D01G148800.1	Wheat	cytosol	46.51	44.94
TraesCS2D01G544700.1	Wheat	cytosol	42.44	44.92
TraesCS2D01G059500.1	Wheat	cytosol	45.93	44.13
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	44.48	44.09
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	44.48	43.97
TraesCS2D01G363600.1	Wheat	cytosol	45.93	43.65
TraesCS6D01G256000.1	Wheat	cytosol	48.84	43.64
TraesCS5D01G048300.1	Wheat	plastid	44.77	43.63
TraesCS5D01G048000.1	Wheat	cytosol	42.73	42.86
TraesCS7D01G501200.1	Wheat	cytosol	45.93	42.59
TraesCS7D01G500400.1	Wheat	cytosol	45.06	42.23
TraesCS7D01G537000.1	Wheat	cytosol	34.59	42.2
TraesCS2D01G544900.1	Wheat	plastid	33.72	41.43
TraesCS5D01G474700.1	Wheat	cytosol	27.03	39.91
TraesCS6D01G156500.1	Wheat	plastid	38.66	39.82
TraesCS3D01G026500.1	Wheat	mitochondrion	43.6	38.96
TraesCS7D01G308000.1	Wheat	cytosol	40.12	38.66
TraesCS2D01G472200.1	Wheat	cytosol	37.5	37.94
TraesCS2D01G472400.1	Wheat	cytosol	40.12	37.91
TraesCS5D01G047800.1	Wheat	peroxisome	40.7	37.33
TraesCS3D01G214900.1	Wheat	cytosol	26.74	36.95
TraesCS3D01G310900.1	Wheat	cytosol	30.23	36.49
TraesCS7D01G501100.1	Wheat	plastid	30.23	35.74
TraesCS3D01G513100.1	Wheat	cytosol, plastid	36.63	35.69
TraesCS7D01G307900.1	Wheat	cytosol, plastid	37.79	35.52
TraesCS4D01G353300.1	Wheat	cytosol	36.63	35.2
TraesCS2D01G469800.1	Wheat	plastid	36.34	35.01
TraesCS7D01G307800.1	Wheat	cytosol	32.56	34.89
TraesCS2D01G470700.1	Wheat	cytosol	36.34	34.63
TraesCS5D01G370700.1	Wheat	cytosol	27.62	34.17
TraesCS2D01G472300.1	Wheat	cytosol	36.34	33.16
TraesCS4D01G197600.1	Wheat	cytosol	32.85	32.19
TraesCS2D01G266900.1	Wheat	cytosol	36.34	31.57
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	37.79	30.59
TraesCS2D01G471800.1	Wheat	cytosol	35.47	29.54
TraesCS2D01G246900.1	Wheat	cytosol, plastid	35.76	28.87
TraesCS5D01G437400.1	Wheat	cytosol	36.63	27.33
TraesCS2D01G471700.1	Wheat	cytosol	30.52	25.24

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211
InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
EnsemblPlantsGene:TraesCS3D01G177000	EnsemblPlants:TraesCS3D01G177000.1	TIGR:cd00121	TIGR:cd14736	:	:

Description

No Description!

Coordinates

chr3D:+:158449943..158450977

Molecular Weight (calculated)

38336.0 Da

IEP (calculated)

4.939

GRAVY (calculated)

-0.047

Length

344 amino acids

Sequence
(BLAST)

001: MGCTASTRRA GWGSLVFDVS GYGGVSLDVQ SSEVFTVGAY DWQIRFYEEG VFGHSGGYVA VYLFLVSKKA KVRATFELSL VDITGSTPPR TMRTVDAEFD
101: SGDRTCFGHP EFMRKSELEA SPYLRGDRLT IECAITICKE APVSSKSFAE VPPSDITDHL RKLWQGKEGS DVTFEVQGEA FPAHKTVLAM RSPVFKAELY
201: GALRENDMGR VIIGDMQPAV FEALLHFIYT DSLPTMDDLY QDQDEYKEII GHLLVAADRY AMERLKIICE SILCKNIDVK TVVTTLALAD QHHCNKLTDA
301: CIEFIASLGK VDDIIASQGY AELKRTCPLA LLELWEKATR LYMI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.