Factsheet for TraesCS2D01G415300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G418000.1	Wheat	cytosol	90.54	91.28
TraesCS2A01G418100.1	Wheat	cytosol	88.92	89.4
TraesCS2D01G458900.1	Wheat	extracellular	27.84	69.59
TraesCS3D01G177000.1	Wheat	cytosol	60.81	65.41
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	40.27	62.87
TraesCS2D01G059700.1	Wheat	cytosol	20.0	54.41
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	21.35	50.97
TraesCS3D01G352200.1	Wheat	cytosol	40.0	50.17
TraesCS5D01G047900.1	Wheat	cytosol	18.92	50.0
OQU80115	Sorghum	cytosol	46.76	49.43
TraesCS2D01G544500.1	Wheat	cytosol, plastid	39.19	48.82
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	45.68	48.56
TraesCS5D01G462100.1	Wheat	cytosol	46.22	47.77
TraesCS2D01G363000.1	Wheat	mitochondrion	46.76	47.27
TraesCS2D01G059500.1	Wheat	cytosol	44.59	46.09
TraesCS7D01G148800.1	Wheat	cytosol	44.05	45.79
TraesCS5D01G461700.1	Wheat	cytosol	44.86	45.73
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	42.7	45.53
TraesCS5D01G048300.1	Wheat	plastid	43.24	45.33
TraesCS2D01G363600.1	Wheat	cytosol	44.32	45.3
TraesCS5D01G048000.1	Wheat	cytosol	41.89	45.19
TraesCS3D01G026900.1	Wheat	cytosol	44.32	45.18
TraesCS2D01G544700.1	Wheat	cytosol	39.46	44.92
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	41.89	44.54
TraesCS7D01G501200.1	Wheat	cytosol	44.59	44.47
TraesCS7D01G024000.1	Wheat	mitochondrion	42.7	44.26
TraesCS5D01G474700.1	Wheat	cytosol	26.49	42.06
TraesCS6D01G256000.1	Wheat	cytosol	43.51	41.82
TraesCS3D01G214900.1	Wheat	cytosol	27.57	40.96
TraesCS7D01G500400.1	Wheat	cytosol	40.54	40.87
TraesCS6D01G156500.1	Wheat	plastid	36.49	40.42
TraesCS3D01G310900.1	Wheat	cytosol	30.0	38.95
TraesCS2D01G544900.1	Wheat	plastid	29.46	38.93
TraesCS7D01G501100.1	Wheat	plastid	30.54	38.83
TraesCS7D01G537000.1	Wheat	cytosol	29.46	38.65
TraesCS5D01G047800.1	Wheat	peroxisome	38.92	38.4
TraesCS7D01G308000.1	Wheat	cytosol	37.03	38.38
TraesCS3D01G026500.1	Wheat	mitochondrion	39.73	38.18
TraesCS7D01G307900.1	Wheat	cytosol, plastid	37.03	37.43
TraesCS2D01G472400.1	Wheat	cytosol	36.76	37.36
TraesCS2D01G472200.1	Wheat	cytosol	34.32	37.35
TraesCS5D01G370700.1	Wheat	cytosol	26.76	35.61
TraesCS3D01G513100.1	Wheat	cytosol, plastid	33.78	35.41
TraesCS4D01G353300.1	Wheat	cytosol	33.78	34.92
TraesCS4D01G197600.1	Wheat	cytosol	32.97	34.76
TraesCS7D01G307800.1	Wheat	cytosol	29.46	33.96
TraesCS2D01G470700.1	Wheat	cytosol	32.7	33.52
TraesCS2D01G469800.1	Wheat	plastid	32.16	33.33
TraesCS2D01G472300.1	Wheat	cytosol	33.51	32.89
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	37.03	32.24
TraesCS2D01G266900.1	Wheat	cytosol	32.97	30.81
TraesCS2D01G246900.1	Wheat	cytosol, plastid	35.14	30.52
TraesCS2D01G471800.1	Wheat	cytosol	32.43	29.06
TraesCS5D01G437400.1	Wheat	cytosol	35.41	28.42
TraesCS2D01G471700.1	Wheat	cytosol	27.3	24.28

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379
PANTHER:PTHR26379:SF211	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695
InterPro:TRAF-like	EnsemblPlantsGene:TraesCS2D01G415300	EnsemblPlants:TraesCS2D01G415300.1	TIGR:cd00121	TIGR:cd14736	:

Description

No Description!

Coordinates

chr2D:-:529035267..529037968

Molecular Weight (calculated)

41288.4 Da

IEP (calculated)

6.049

GRAVY (calculated)

-0.134

Length

370 amino acids

Sequence
(BLAST)

001: MGSTNTPATR HAANTVGVQQ GQGSHVFEIA GYSLHRSLLH GGCAMSAAFS VGGYDWQFRV YPWGVCDLDY YRDYVGVFLD LCSDHKDARV RASFRFSLVD
101: VTGSSPPHTM TKTREFGSGG TSCSGDWVFK KRSELEGSPY LRDDRLTVEC VVTIVEDEKS FVEEVPPSDI TDHLGKLLQG KEGTDVIFEV QGEAFPAHKL
201: VLAMRSPVFK AELYGAMREK DMSRITINDM QPAVFEALLH FIYTDSLPAM DDIGRDDYKD IVSHLLVAAD RYAMERLKLI CESILYKNID VKTVVSMLAF
301: ADWHHCSRLN DACIRFIATL DTRGMDDMMT SQGYVKLKET CPLALVELLE KTSRLAKSKS SIHIGSLVYA

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.