Factsheet for TraesCS2D01G471800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G494600.1	Wheat	cytosol	68.28	76.42
TraesCS2A01G471800.1	Wheat	mitochondrion	83.54	76.33
TraesCS4D01G353300.1	Wheat	cytosol	46.49	53.63
TraesCS3D01G513100.1	Wheat	cytosol, plastid	45.76	53.54
TraesCS5D01G370700.1	Wheat	cytosol	35.59	52.88
TraesCS2D01G471700.1	Wheat	cytosol	52.06	51.68
TraesCS2D01G472300.1	Wheat	cytosol	46.25	50.66
TraesCS2D01G472400.1	Wheat	cytosol	43.83	49.73
TraesCS2D01G472200.1	Wheat	cytosol	40.44	49.12
OQU82372	Sorghum	plastid	39.23	47.51
OQU82373	Sorghum	cytosol, plastid	38.01	46.31
TraesCS2D01G470700.1	Wheat	cytosol	39.95	45.71
Os04t0625500-00	Rice	plastid	40.92	45.07
Os04t0625400-00	Rice	plastid	35.11	43.94
TraesCS2D01G469800.1	Wheat	plastid	37.77	43.7
TraesCS2D01G059700.1	Wheat	cytosol	14.29	43.38
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	15.25	40.65
TraesCS5D01G047900.1	Wheat	cytosol	13.56	40.0
TraesCS2D01G363000.1	Wheat	mitochondrion	34.87	39.34
TraesCS2D01G544500.1	Wheat	cytosol, plastid	27.84	38.72
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	32.2	38.33
EES11459	Sorghum	plastid	35.11	38.06
TraesCS2D01G059500.1	Wheat	cytosol	32.69	37.71
TraesCS7D01G024000.1	Wheat	mitochondrion	32.45	37.53
TraesCS6D01G256000.1	Wheat	cytosol	34.87	37.4
TraesCS4D01G197600.1	Wheat	cytosol	31.72	37.32
TraesCS5D01G462100.1	Wheat	cytosol	31.96	36.87
TraesCS2D01G544700.1	Wheat	cytosol	28.81	36.62
TraesCS2D01G458900.1	Wheat	extracellular	13.08	36.49
TraesCS2D01G363600.1	Wheat	cytosol	31.96	36.46
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	30.51	36.21
TraesCS7D01G308000.1	Wheat	cytosol	31.23	36.13
TraesCS3D01G026900.1	Wheat	cytosol	31.72	36.09
TraesCS2D01G544900.1	Wheat	plastid	24.21	35.71
TraesCS7D01G148800.1	Wheat	cytosol	30.75	35.67
TraesCS3D01G352200.1	Wheat	cytosol	25.42	35.59
TraesCS7D01G501200.1	Wheat	cytosol	31.96	35.58
TraesCS3D01G177000.1	Wheat	cytosol	29.54	35.47
TraesCS7D01G500400.1	Wheat	cytosol	31.48	35.42
TraesCS5D01G461700.1	Wheat	cytosol	30.99	35.26
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	29.06	34.48
TraesCS7D01G307900.1	Wheat	cytosol, plastid	30.51	34.43
TraesCS5D01G048000.1	Wheat	cytosol	28.57	34.4
TraesCS7D01G501100.1	Wheat	plastid	24.21	34.36
TraesCS5D01G048300.1	Wheat	plastid	29.06	33.99
TraesCS6D01G156500.1	Wheat	plastid	27.12	33.53
TraesCS7D01G537000.1	Wheat	cytosol	22.52	32.98
TraesCS2D01G266900.1	Wheat	cytosol	31.23	32.58
TraesCS3D01G214900.1	Wheat	cytosol	19.61	32.53
TraesCS2D01G415300.1	Wheat	cytosol	29.06	32.43
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	32.93	32.0
TraesCS5D01G474700.1	Wheat	cytosol	17.92	31.76
TraesCS5D01G047800.1	Wheat	peroxisome	28.81	31.73
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	17.68	30.8
TraesCS2D01G246900.1	Wheat	cytosol, plastid	31.72	30.75
TraesCS3D01G026500.1	Wheat	mitochondrion	28.57	30.65
TraesCS7D01G307800.1	Wheat	cytosol	23.0	29.59
TraesCS3D01G310900.1	Wheat	cytosol	20.34	29.47
TraesCS5D01G437400.1	Wheat	cytosol	31.48	28.2

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF224
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	TMHMM:TMhelix	InterPro:TRAF-like
EnsemblPlantsGene:TraesCS2D01G471800	EnsemblPlants:TraesCS2D01G471800.1	TIGR:cd00121	TIGR:cd14736	SEG:seg	:

Description

No Description!

Coordinates

chr2D:+:575704704..575706504

Molecular Weight (calculated)

46507.7 Da

IEP (calculated)

7.500

GRAVY (calculated)

-0.285

Length

413 amino acids

Sequence
(BLAST)

001: MGNIIASSAH QYAPETETWS RCYTEGTTVT HNFEIAGYSL LHGMGTGNYV TSSTFTVGGC DNCEWDIMFY PDGATKDEGE EADHASAYLR LRPCSRQPWP
101: TAVMTKYTLS LWGKDGQLCQ QRSTRHTFTP GGTGWGHVRF VPKSKLLALK DDCFTITCVL TVLKERHMEE VSTFIVPIPT SNFHQDFGNM LKDGEGTDVT
201: FVVGDQSFQA HRALLAARTP FFRAELFGPM KENKMQRINI DDVEPSVFKA LLHFIYTDAL PDNHDVRKNT TLQHLMVAAD RYGLDRLAAM CEGELCRGID
301: VQTVATTLTL AKQHCRERLK DICIDFMSSR DVFGDVKKTD GFKHLVTSCP EVITDILQEN LPLPEVVRTN PRRTPGWLKR QQRSSQVRRA VLVSACVLVP
401: AVVVSCRVYM RRH

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.