Factsheet for TraesCS2D01G508700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G508000.1	Wheat	cytosol	36.31	90.0
TraesCS5D01G047900.1	Wheat	cytosol	32.28	80.0
HORVU2Hr1G112920.1	Barley	cytosol	80.4	79.49
TraesCS5D01G048300.1	Wheat	plastid	73.78	72.52
TraesCS5D01G048000.1	Wheat	cytosol	71.47	72.3
TraesCS5D01G047800.1	Wheat	peroxisome	65.42	60.53
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	26.22	58.71
TraesCS3D01G352200.1	Wheat	cytosol	46.97	55.25
TraesCS2D01G363000.1	Wheat	mitochondrion	57.64	54.64
TraesCS7D01G024000.1	Wheat	mitochondrion	55.04	53.5
TraesCS3D01G026900.1	Wheat	cytosol	55.91	53.44
TraesCS2D01G544500.1	Wheat	cytosol, plastid	45.24	52.86
TraesCS2D01G363600.1	Wheat	cytosol	54.18	51.93
TraesCS2D01G059700.1	Wheat	cytosol	19.88	50.74
TraesCS7D01G500400.1	Wheat	cytosol	53.31	50.41
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	50.43	50.29
TraesCS2D01G458900.1	Wheat	extracellular	20.75	48.65
TraesCS2D01G544700.1	Wheat	cytosol	44.96	48.0
TraesCS7D01G501200.1	Wheat	cytosol	50.72	47.44
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	46.97	46.84
TraesCS7D01G148800.1	Wheat	cytosol	46.97	45.79
TraesCS3D01G026500.1	Wheat	mitochondrion	49.57	44.68
TraesCS3D01G177000.1	Wheat	cytosol	44.09	44.48
TraesCS2D01G544900.1	Wheat	plastid	35.45	43.93
TraesCS6D01G256000.1	Wheat	cytosol	47.84	43.12
TraesCS5D01G462100.1	Wheat	cytosol	44.09	42.74
TraesCS2D01G415300.1	Wheat	cytosol	45.53	42.7
TraesCS2D01G059500.1	Wheat	cytosol	43.52	42.18
TraesCS3D01G310900.1	Wheat	cytosol	34.58	42.11
TraesCS5D01G461700.1	Wheat	cytosol	42.65	40.77
TraesCS7D01G501100.1	Wheat	plastid	33.72	40.21
TraesCS7D01G308000.1	Wheat	cytosol	41.21	40.06
TraesCS2D01G472200.1	Wheat	cytosol	39.19	40.0
TraesCS7D01G537000.1	Wheat	cytosol	31.99	39.36
TraesCS6D01G156500.1	Wheat	plastid	36.89	38.32
TraesCS7D01G307900.1	Wheat	cytosol, plastid	40.35	38.25
TraesCS3D01G214900.1	Wheat	cytosol	27.38	38.15
TraesCS3D01G513100.1	Wheat	cytosol, plastid	38.62	37.96
TraesCS2D01G472300.1	Wheat	cytosol	40.35	37.14
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	25.36	37.13
TraesCS4D01G353300.1	Wheat	cytosol	38.04	36.87
TraesCS2D01G470700.1	Wheat	cytosol	37.75	36.29
TraesCS2D01G472400.1	Wheat	cytosol	38.04	36.26
TraesCS5D01G474700.1	Wheat	cytosol	24.21	36.05
TraesCS5D01G370700.1	Wheat	cytosol	28.82	35.97
TraesCS2D01G469800.1	Wheat	plastid	36.89	35.85
TraesCS4D01G197600.1	Wheat	cytosol	34.29	33.9
TraesCS2D01G471800.1	Wheat	cytosol	38.33	32.2
TraesCS7D01G307800.1	Wheat	cytosol	29.68	32.09
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	38.33	31.29
TraesCS2D01G266900.1	Wheat	cytosol	35.45	31.06
TraesCS2D01G246900.1	Wheat	cytosol, plastid	36.89	30.05
TraesCS5D01G437400.1	Wheat	cytosol	38.33	28.85
TraesCS2D01G471700.1	Wheat	cytosol	31.41	26.2

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379
PANTHER:PTHR26379:SF211	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
EnsemblPlantsGene:TraesCS2D01G508700	EnsemblPlants:TraesCS2D01G508700.1	TIGR:cd00121	TIGR:cd14736	SEG:seg	:

Description

No Description!

Coordinates

chr2D:+:601426926..601427973

Molecular Weight (calculated)

38987.8 Da

IEP (calculated)

5.147

GRAVY (calculated)

-0.136

Length

347 amino acids

Sequence
(BLAST)

001: MAASQSSISR VPSRCTETAQ ATVAFEIAGY SLHKGLGRGK YLRSPVFSIG GYDWCIQYYP DGKNEDYEGY VSVFLELLTK NAEATVHYDW MLVEPVRGES
101: IAALRQRATF NSQKSFWGIP KFFKTTVENE SFFLRNDCLV IECEVSVTKG TIEVPVPPSD LLDNLATLLE GKKGADVTFK VQGEVFPAHK NLLAMRSAVF
201: DAEFYGPMAD KGAQDITIDE MQPAVFKAFL HFIYTDTMPS MDDLDDDDKR EMVKHLLVAA DKYAMARMKR ICEGMLCECL DVETVATILA LADQHHCSNL
301: KDACIEFMLS SNRMDDVIAS QGYLHLKRSF PGLFAEMFER SVKSRKI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.