Factsheet for TraesCS3D01G026500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G025700.1	Wheat	cytosol	92.99	92.51
TraesCS3A01G020800.1	Wheat	cytosol	75.58	81.74
TraesCS3D01G026900.1	Wheat	cytosol	62.34	66.12
TraesCS5D01G047900.1	Wheat	cytosol	22.86	62.86
TraesCS2D01G059700.1	Wheat	cytosol	19.48	55.15
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	22.08	54.84
TraesCS3D01G352200.1	Wheat	cytosol	41.56	54.24
TraesCS5D01G048000.1	Wheat	cytosol	45.97	51.6
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	44.94	49.71
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	44.68	49.57
TraesCS2D01G363000.1	Wheat	mitochondrion	46.49	48.91
TraesCS2D01G363600.1	Wheat	cytosol	45.19	48.07
TraesCS5D01G048300.1	Wheat	plastid	43.9	47.88
TraesCS2D01G544500.1	Wheat	cytosol, plastid	36.62	47.47
TraesCS7D01G500400.1	Wheat	cytosol	43.9	46.05
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	41.56	45.98
TraesCS2D01G458900.1	Wheat	extracellular	17.66	45.95
TraesCS7D01G024000.1	Wheat	mitochondrion	42.34	45.66
TraesCS2D01G544700.1	Wheat	cytosol	37.4	44.31
TraesCS3D01G177000.1	Wheat	cytosol	38.96	43.6
TraesCS7D01G501200.1	Wheat	cytosol	41.82	43.4
TraesCS2D01G059500.1	Wheat	cytosol	39.48	42.46
TraesCS5D01G047800.1	Wheat	peroxisome	40.78	41.87
TraesCS5D01G462100.1	Wheat	cytosol	38.7	41.62
TraesCS7D01G148800.1	Wheat	cytosol	38.44	41.57
TraesCS6D01G256000.1	Wheat	cytosol	40.52	40.52
TraesCS5D01G461700.1	Wheat	cytosol	37.92	40.22
TraesCS2D01G415300.1	Wheat	cytosol	38.18	39.73
TraesCS3D01G310900.1	Wheat	cytosol	29.35	39.65
TraesCS2D01G544900.1	Wheat	plastid	28.83	39.64
TraesCS7D01G537000.1	Wheat	cytosol	28.31	38.65
TraesCS7D01G308000.1	Wheat	cytosol	34.81	37.53
TraesCS7D01G307900.1	Wheat	cytosol, plastid	34.81	36.61
TraesCS7D01G501100.1	Wheat	plastid	27.01	35.74
TraesCS2D01G469800.1	Wheat	plastid	32.99	35.57
TraesCS2D01G472200.1	Wheat	cytosol	31.17	35.29
TraesCS3D01G214900.1	Wheat	cytosol	22.6	34.94
TraesCS2D01G472400.1	Wheat	cytosol	32.73	34.62
TraesCS6D01G156500.1	Wheat	plastid	29.87	34.43
TraesCS4D01G353300.1	Wheat	cytosol	31.95	34.36
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	21.04	34.18
TraesCS2D01G266900.1	Wheat	cytosol	34.29	33.33
TraesCS3D01G513100.1	Wheat	cytosol, plastid	30.39	33.14
TraesCS2D01G470700.1	Wheat	cytosol	30.65	32.69
TraesCS7D01G307800.1	Wheat	cytosol	27.01	32.4
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	35.06	31.76
TraesCS4D01G197600.1	Wheat	cytosol	28.83	31.62
TraesCS2D01G472300.1	Wheat	cytosol	30.91	31.57
TraesCS5D01G370700.1	Wheat	cytosol	22.34	30.94
TraesCS5D01G474700.1	Wheat	cytosol	18.7	30.9
TraesCS2D01G471800.1	Wheat	cytosol	30.65	28.57
TraesCS2D01G246900.1	Wheat	cytosol, plastid	31.43	28.4
TraesCS5D01G437400.1	Wheat	cytosol	31.95	26.68
TraesCS2D01G471700.1	Wheat	cytosol	25.97	24.04

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS3D01G026500
EnsemblPlants:TraesCS3D01G026500.1	TIGR:cd00121	TIGR:cd14736	SEG:seg	:	:

Description

No Description!

Coordinates

chr3D:-:9066387..9068862

Molecular Weight (calculated)

42517.5 Da

IEP (calculated)

5.055

GRAVY (calculated)

-0.302

Length

385 amino acids

Sequence
(BLAST)

001: MAGSGGRRCS PPPVHSAWPA DPYATAAPNH RSEAAVFPPP PPTPVAAPPP AMIGGGGGRR RDFGSNDGGE YIQSATFAIG GYDWCVRYYP DGETQDCRGY
101: VSIFLELLTR NAKVRAEYEF RLVDSGSALP PSPVTHLFTN NYNTVDPDED PASYGAHRFM KQQEVKPYVR DDCLEIECEV VVINAITKLE VQDVPPSDLP
201: NHLRKLLDGK RGADVTFEVE DEVFSAHKIM LATRSPVFDA QLYGPLSDSM SKNIIVKDME PPVFKALLYF IYTDSLPAMD DADDGESEDM VKHLLVAADR
301: YAMDRMKMMC EDILCKSLDV ETVATTLALA DQHHCSKLKD ACVEYILSSN RLNAVVASKG YAHLKRSCPA LMFDLFERAT KSHKI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.