Factsheet for TraesCS7D01G501200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	25.61	61.29
TraesCS7D01G501100.1	Wheat	plastid	47.98	61.17
TraesCS5D01G047900.1	Wheat	cytosol	22.37	59.29
TraesCS7D01G500400.1	Wheat	cytosol	54.45	55.04
TraesCS3D01G352200.1	Wheat	cytosol	42.05	52.88
TraesCS2D01G544500.1	Wheat	cytosol, plastid	41.78	52.19
TraesCS2D01G363000.1	Wheat	mitochondrion	50.94	51.64
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	48.25	51.44
TraesCS5D01G048000.1	Wheat	cytosol	47.44	51.31
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	47.44	50.72
TraesCS5D01G048300.1	Wheat	plastid	48.25	50.71
TraesCS3D01G026900.1	Wheat	cytosol	48.79	49.86
TraesCS7D01G024000.1	Wheat	mitochondrion	47.71	49.58
TraesCS2D01G458900.1	Wheat	extracellular	19.68	49.32
TraesCS2D01G059700.1	Wheat	cytosol	18.06	49.26
TraesCS2D01G544700.1	Wheat	cytosol	42.86	48.92
TraesCS3D01G310900.1	Wheat	cytosol	37.47	48.77
TraesCS5D01G462100.1	Wheat	cytosol	46.09	47.77
TraesCS2D01G363600.1	Wheat	cytosol	46.36	47.51
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	43.4	46.26
TraesCS3D01G177000.1	Wheat	cytosol	42.59	45.93
TraesCS7D01G148800.1	Wheat	cytosol	43.4	45.22
TraesCS2D01G544900.1	Wheat	plastid	33.69	44.64
TraesCS2D01G415300.1	Wheat	cytosol	44.47	44.59
TraesCS5D01G461700.1	Wheat	cytosol	43.4	44.35
TraesCS6D01G256000.1	Wheat	cytosol	45.55	43.9
TraesCS2D01G059500.1	Wheat	cytosol	42.32	43.85
TraesCS5D01G047800.1	Wheat	peroxisome	42.32	41.87
TraesCS3D01G026500.1	Wheat	mitochondrion	43.4	41.82
TraesCS3D01G214900.1	Wheat	cytosol	28.03	41.77
TraesCS2D01G472200.1	Wheat	cytosol	38.27	41.76
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	26.15	40.93
TraesCS6D01G156500.1	Wheat	plastid	36.39	40.42
TraesCS7D01G307900.1	Wheat	cytosol, plastid	38.54	39.07
TraesCS5D01G474700.1	Wheat	cytosol	24.53	39.06
TraesCS7D01G308000.1	Wheat	cytosol	37.2	38.66
TraesCS4D01G353300.1	Wheat	cytosol	36.66	37.99
TraesCS3D01G513100.1	Wheat	cytosol, plastid	36.12	37.96
TraesCS7D01G537000.1	Wheat	cytosol	28.84	37.94
TraesCS2D01G472400.1	Wheat	cytosol	37.2	37.91
TraesCS5D01G370700.1	Wheat	cytosol	27.76	37.05
TraesCS2D01G472300.1	Wheat	cytosol	36.93	36.34
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	41.24	36.0
TraesCS2D01G470700.1	Wheat	cytosol	34.23	35.18
TraesCS2D01G469800.1	Wheat	plastid	33.69	35.01
TraesCS7D01G307800.1	Wheat	cytosol	30.19	34.89
TraesCS2D01G266900.1	Wheat	cytosol	37.2	34.85
TraesCS4D01G197600.1	Wheat	cytosol	31.54	33.33
TraesCS2D01G471800.1	Wheat	cytosol	35.58	31.96
TraesCS2D01G246900.1	Wheat	cytosol, plastid	36.66	31.92
TraesCS5D01G437400.1	Wheat	cytosol	36.12	29.07
TraesCS2D01G471700.1	Wheat	cytosol	31.0	27.64

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS7D01G501200
EnsemblPlants:TraesCS7D01G501200.1	TIGR:cd00121	TIGR:cd14736	SEG:seg	:	:

Description

No Description!

Coordinates

chr7D:+:607103278..607110376

Molecular Weight (calculated)

41684.4 Da

IEP (calculated)

6.421

GRAVY (calculated)

-0.105

Length

371 amino acids

Sequence
(BLAST)

001: MAASLIPDPV ISTTSTCAPE RTRGEHVFKI EGYSVCKGFG VGKFIRSATF SVGGHDWCVR YYPDGVTEAY RDYVSVYLEL MNRDVEVLAL CHLTLVQQAT
101: GSPAQFASPK LMAPVLLSSS IGSITWSWGY ATFATRSDLE ASSHWYIPDD VLLIKCELTV IKPKVAQMSM TTRNFHIQVP PSDLSDNLRS LLEEGEGSDV
201: SFKVKDEVFT VEKIVLAMRS PVFKAELYGP MRDKFEQSIT IKDMEPAVFK ALLRFIYSDE LPPMDDLNDD DKQEMVKHLL VATDRYGVER MKLMCERKLC
301: KFLEANNVAT TLALADQHHC SKLKDACIGF INSLDRVDDV MTSTGYQHLK RACPSVFVGM WEKAAKIRKL Q

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.