Factsheet for TraesCS4D01G353300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G360000.1	Wheat	cytosol	91.9	91.9
TraesCS5D01G370700.1	Wheat	cytosol	57.26	73.74
TraesCS3D01G513100.1	Wheat	cytosol, plastid	70.67	71.67
TraesCS2D01G472200.1	Wheat	cytosol	53.35	56.18
OQU82372	Sorghum	plastid	53.07	55.72
TraesCS2D01G472300.1	Wheat	cytosol	57.26	54.38
OQU82373	Sorghum	cytosol, plastid	49.16	51.92
TraesCS2D01G470700.1	Wheat	cytosol	51.96	51.52
Os04t0625500-00	Rice	plastid	52.23	49.87
TraesCS2D01G472400.1	Wheat	cytosol	50.28	49.45
TraesCS2D01G469800.1	Wheat	plastid	47.77	47.9
Os04t0625400-00	Rice	plastid	43.3	46.97
TraesCS2D01G471800.1	Wheat	cytosol	53.63	46.49
TraesCS2D01G059700.1	Wheat	cytosol	17.32	45.59
TraesCS2D01G471700.1	Wheat	cytosol	51.68	44.47
EES11459	Sorghum	plastid	47.21	44.36
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	17.32	40.0
TraesCS2D01G363000.1	Wheat	mitochondrion	40.5	39.62
TraesCS4D01G197600.1	Wheat	cytosol	38.55	39.32
TraesCS2D01G059500.1	Wheat	cytosol	39.11	39.11
TraesCS7D01G024000.1	Wheat	mitochondrion	38.55	38.66
TraesCS2D01G544500.1	Wheat	cytosol, plastid	31.84	38.38
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	36.87	38.04
TraesCS3D01G352200.1	Wheat	cytosol	31.28	37.97
TraesCS2D01G458900.1	Wheat	extracellular	15.64	37.84
TraesCS5D01G462100.1	Wheat	cytosol	37.71	37.71
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	36.59	37.64
TraesCS2D01G544700.1	Wheat	cytosol	33.8	37.23
TraesCS2D01G363600.1	Wheat	cytosol	37.15	36.74
TraesCS7D01G501200.1	Wheat	cytosol	37.99	36.66
TraesCS3D01G026900.1	Wheat	cytosol	37.15	36.64
TraesCS3D01G177000.1	Wheat	cytosol	35.2	36.63
TraesCS7D01G148800.1	Wheat	cytosol	36.31	36.52
TraesCS7D01G500400.1	Wheat	cytosol	37.43	36.51
TraesCS6D01G256000.1	Wheat	cytosol	38.55	35.84
TraesCS5D01G047900.1	Wheat	cytosol	13.97	35.71
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	34.64	35.63
TraesCS6D01G156500.1	Wheat	plastid	33.24	35.63
TraesCS5D01G048000.1	Wheat	cytosol	34.08	35.57
TraesCS7D01G537000.1	Wheat	cytosol	27.93	35.46
TraesCS5D01G461700.1	Wheat	cytosol	35.75	35.26
TraesCS7D01G308000.1	Wheat	cytosol	34.64	34.73
TraesCS5D01G048300.1	Wheat	plastid	34.08	34.56
TraesCS7D01G307900.1	Wheat	cytosol, plastid	34.92	34.15
TraesCS2D01G544900.1	Wheat	plastid	26.54	33.93
TraesCS2D01G266900.1	Wheat	cytosol	37.43	33.84
TraesCS2D01G415300.1	Wheat	cytosol	34.92	33.78
TraesCS7D01G501100.1	Wheat	plastid	26.82	32.99
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	38.83	32.71
TraesCS5D01G474700.1	Wheat	cytosol	21.23	32.62
TraesCS3D01G214900.1	Wheat	cytosol	22.63	32.53
TraesCS3D01G026500.1	Wheat	mitochondrion	34.36	31.95
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	20.67	31.22
TraesCS2D01G246900.1	Wheat	cytosol, plastid	36.31	30.52
TraesCS3D01G310900.1	Wheat	cytosol	24.02	30.18
TraesCS5D01G047800.1	Wheat	peroxisome	30.45	29.07
TraesCS5D01G437400.1	Wheat	cytosol	36.87	28.63
TraesCS7D01G307800.1	Wheat	cytosol	25.42	28.35

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379
PANTHER:PTHR26379:SF224	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695
InterPro:TRAF-like	EnsemblPlantsGene:TraesCS4D01G353300	EnsemblPlants:TraesCS4D01G353300.1	TIGR:cd00121	TIGR:cd14736	:

Description

No Description!

Coordinates

chr4D:-:503968880..503969956

Molecular Weight (calculated)

39693.5 Da

IEP (calculated)

6.284

GRAVY (calculated)

-0.131

Length

358 amino acids

Sequence
(BLAST)

001: MGNILTSAIN KPIPETSSRC LTECVTAAHN FEVIKYSLLE GTGIGKFVSS SKFNVSGYDW NIRIYPDGAM KEDKAAYMSV YLCFCGGATR DAKVKYTFSL
101: LEKDGKVSNL TDGAYTFSSA STGRGWTNFI DKSKLKELLS RNDDCLTIRC VLTVIKDHHT EQVGTVPVQV PQSDLHTHFA NMLKDGEGAD VTFSVGDQLF
201: SAHRYVLAAR SSVFKAELFG EMKETTTEHV KIDDMEPAIL DALLYFMYTD SLPSDFDVDQ NVSLQHLLVA ADRYGLDRLK AICEEKLCQK FDVQTVATTL
301: ALAEQHHSLQ LKRACLGYLS LQDVLRAVKK TDGFKHLTTS CPSIMMEILD KVAPSSQV

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.