Factsheet for TraesCS6D01G256000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G303100.1	Wheat	cytosol	92.47	98.07
TraesCS6A01G275800.1	Wheat	cytosol	94.55	97.85
HORVU6Hr1G069480.1	Barley	plastid	84.94	68.84
TraesCS2D01G059700.1	Wheat	cytosol	22.6	63.97
TraesCS5D01G047900.1	Wheat	cytosol	21.3	58.57
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	22.34	55.48
TraesCS2D01G544500.1	Wheat	cytosol, plastid	39.74	51.52
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	46.23	51.15
TraesCS7D01G148800.1	Wheat	cytosol	47.27	51.12
TraesCS2D01G363000.1	Wheat	mitochondrion	47.53	50.0
TraesCS5D01G462100.1	Wheat	cytosol	46.49	50.0
TraesCS5D01G048000.1	Wheat	cytosol	44.42	49.85
TraesCS2D01G059500.1	Wheat	cytosol	46.23	49.72
TraesCS3D01G352200.1	Wheat	cytosol	37.92	49.49
TraesCS2D01G458900.1	Wheat	extracellular	18.96	49.32
TraesCS3D01G177000.1	Wheat	cytosol	43.64	48.84
TraesCS5D01G048300.1	Wheat	plastid	44.68	48.73
TraesCS2D01G363600.1	Wheat	cytosol	45.71	48.62
TraesCS5D01G461700.1	Wheat	cytosol	45.45	48.21
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	43.12	47.84
TraesCS3D01G026900.1	Wheat	cytosol	44.68	47.38
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	42.6	47.13
TraesCS7D01G024000.1	Wheat	mitochondrion	43.38	46.78
TraesCS7D01G501200.1	Wheat	cytosol	43.9	45.55
TraesCS2D01G544700.1	Wheat	cytosol	38.44	45.54
TraesCS7D01G500400.1	Wheat	cytosol	42.34	44.41
TraesCS2D01G544900.1	Wheat	plastid	31.69	43.57
TraesCS2D01G415300.1	Wheat	cytosol	41.82	43.51
TraesCS7D01G501100.1	Wheat	plastid	32.73	43.3
TraesCS3D01G214900.1	Wheat	cytosol	27.27	42.17
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	25.71	41.77
TraesCS2D01G472200.1	Wheat	cytosol	36.88	41.76
TraesCS7D01G308000.1	Wheat	cytosol	38.44	41.46
TraesCS7D01G307900.1	Wheat	cytosol, plastid	39.22	41.26
TraesCS3D01G026500.1	Wheat	mitochondrion	40.52	40.52
TraesCS5D01G474700.1	Wheat	cytosol	24.42	40.34
TraesCS5D01G047800.1	Wheat	peroxisome	39.22	40.27
TraesCS3D01G513100.1	Wheat	cytosol, plastid	36.36	39.66
TraesCS2D01G469800.1	Wheat	plastid	36.62	39.5
TraesCS5D01G370700.1	Wheat	cytosol	28.31	39.21
TraesCS2D01G472400.1	Wheat	cytosol	36.62	38.74
TraesCS4D01G353300.1	Wheat	cytosol	35.84	38.55
TraesCS7D01G537000.1	Wheat	cytosol	28.05	38.3
TraesCS3D01G310900.1	Wheat	cytosol	28.31	38.25
TraesCS2D01G470700.1	Wheat	cytosol	35.58	37.95
TraesCS6D01G156500.1	Wheat	plastid	32.21	37.13
TraesCS2D01G472300.1	Wheat	cytosol	34.81	35.54
TraesCS4D01G197600.1	Wheat	cytosol	31.95	35.04
TraesCS2D01G471800.1	Wheat	cytosol	37.4	34.87
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	36.62	33.18
TraesCS7D01G307800.1	Wheat	cytosol	27.27	32.71
TraesCS2D01G266900.1	Wheat	cytosol	32.47	31.57
TraesCS2D01G246900.1	Wheat	cytosol, plastid	34.55	31.22
TraesCS5D01G437400.1	Wheat	cytosol	34.55	28.85
TraesCS2D01G471700.1	Wheat	cytosol	29.61	27.4

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS6D01G256000
EnsemblPlants:TraesCS6D01G256000.1	TIGR:cd00121	TIGR:cd14736	:	:	:

Description

No Description!

Coordinates

chr6D:+:361379651..361380808

Molecular Weight (calculated)

43608.0 Da

IEP (calculated)

6.197

GRAVY (calculated)

-0.148

Length

385 amino acids

Sequence
(BLAST)

001: MFLSYVPHYP LELIMVVDRM ESASKEMALR CTTEKVTASR CSTHKEEGAH IFEIAGYSLK KDMGVEKFVR SVTFTVGGYD WSIRFYPEGT TESPEGCMGI
101: CLELMSSNAE VRTFFRLGLV KHETGLIGSM FTPNNKVFSS KTRNSREYHL FILRSSLEAK PLKYLQDDFL IIKCNITVIK ESEVYETMGH SEIEVPPSDI
201: MEHLAKLLDT KEEADVTFSV GGETFQAHKI LLAMRSPVFK AELFGPMKEK RMRCLTIKDM QPAVFKALLH FIYTDSLPDL DDLEGDDKCE MIRHLLVAAD
301: KYAMDRLKIM CQNILGKSLD VENVATTLAL ADQYSCDKLK DVCIEFIASS DKMDDVVATK GYANLKRSCP SVLIDALEKR SRPRI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.