Factsheet for TraesCS2D01G472400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G472700.1	Wheat	cytosol	98.35	98.35
TraesCS2B01G495400.1	Wheat	cytosol	98.08	98.08
HORVU3Hr1G084920.2	Barley	cytosol	68.68	94.34
Os04t0625600-01	Rice	cytosol	79.4	74.1
HORVU2Hr1G106750.2	Barley	plastid	93.68	71.94
KXG27151	Sorghum	plastid	73.08	68.91
TraesCS2D01G469800.1	Wheat	plastid	53.85	54.9
TraesCS2D01G472200.1	Wheat	cytosol	50.55	54.12
TraesCS2D01G470700.1	Wheat	cytosol	52.47	52.91
TraesCS3D01G513100.1	Wheat	cytosol, plastid	48.9	50.42
TraesCS5D01G370700.1	Wheat	cytosol	38.46	50.36
TraesCS4D01G353300.1	Wheat	cytosol	49.45	50.28
TraesCS2D01G472300.1	Wheat	cytosol	49.18	47.48
TraesCS2D01G471800.1	Wheat	cytosol	49.73	43.83
TraesCS2D01G544500.1	Wheat	cytosol, plastid	33.79	41.41
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	38.46	40.23
TraesCS3D01G177000.1	Wheat	cytosol	37.91	40.12
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	17.03	40.0
TraesCS2D01G363000.1	Wheat	mitochondrion	40.11	39.89
TraesCS2D01G059700.1	Wheat	cytosol	14.84	39.71
TraesCS2D01G471700.1	Wheat	cytosol	45.05	39.42
TraesCS4D01G197600.1	Wheat	cytosol	37.91	39.32
TraesCS2D01G059500.1	Wheat	cytosol	37.64	38.27
TraesCS7D01G024000.1	Wheat	mitochondrion	37.36	38.1
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	36.26	38.04
TraesCS5D01G462100.1	Wheat	cytosol	37.36	37.99
TraesCS2D01G458900.1	Wheat	extracellular	15.38	37.84
TraesCS5D01G461700.1	Wheat	cytosol	37.64	37.74
TraesCS7D01G500400.1	Wheat	cytosol	37.64	37.33
TraesCS7D01G501200.1	Wheat	cytosol	37.91	37.2
TraesCS3D01G026900.1	Wheat	cytosol	37.09	37.19
TraesCS5D01G047900.1	Wheat	cytosol	14.29	37.14
TraesCS7D01G501100.1	Wheat	plastid	29.67	37.11
TraesCS7D01G148800.1	Wheat	cytosol	36.26	37.08
TraesCS5D01G048000.1	Wheat	cytosol	34.89	37.03
TraesCS2D01G544700.1	Wheat	cytosol	32.97	36.92
TraesCS2D01G415300.1	Wheat	cytosol	37.36	36.76
TraesCS6D01G256000.1	Wheat	cytosol	38.74	36.62
TraesCS3D01G352200.1	Wheat	cytosol	29.67	36.61
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	34.89	36.49
TraesCS2D01G266900.1	Wheat	cytosol	39.56	36.36
TraesCS5D01G048300.1	Wheat	plastid	34.89	35.98
TraesCS7D01G537000.1	Wheat	cytosol	27.75	35.82
TraesCS2D01G363600.1	Wheat	cytosol	35.44	35.64
TraesCS2D01G544900.1	Wheat	plastid	27.2	35.36
TraesCS6D01G156500.1	Wheat	plastid	31.87	34.73
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	40.38	34.59
TraesCS7D01G307900.1	Wheat	cytosol, plastid	34.62	34.43
TraesCS5D01G474700.1	Wheat	cytosol	21.98	34.33
TraesCS2D01G246900.1	Wheat	cytosol, plastid	39.56	33.8
TraesCS3D01G214900.1	Wheat	cytosol	23.08	33.73
TraesCS7D01G308000.1	Wheat	cytosol	32.97	33.61
TraesCS3D01G026500.1	Wheat	mitochondrion	34.62	32.73
TraesCS7D01G307800.1	Wheat	cytosol	28.85	32.71
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	20.88	32.07
TraesCS5D01G047800.1	Wheat	peroxisome	31.59	30.67
TraesCS5D01G437400.1	Wheat	cytosol	38.74	30.59
TraesCS3D01G310900.1	Wheat	cytosol	23.9	30.53

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF224
InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
EnsemblPlantsGene:TraesCS2D01G472400	EnsemblPlants:TraesCS2D01G472400.1	TIGR:cd00121	TIGR:cd14736	:	:

Description

No Description!

Coordinates

chr2D:+:576191371..576192465

Molecular Weight (calculated)

40487.5 Da

IEP (calculated)

6.182

GRAVY (calculated)

-0.101

Length

364 amino acids

Sequence
(BLAST)

001: MGDHREFPAL APGHCLPKTS SMSVTDSVTA VHDFRVTGYS LLDGMGVGRF VSSSTFTVGG LDWAVRFYPD GSTANCLGNA SAFLYYCSRD KDVRARFTLN
101: LMENDGRLSQ VTNSYMKHTF SPASDNWGFI KFIEKSKIQG SPFLENDCLT IRCLLTVTKE SRTQDVETNS IVVPPSNLHQ DFGNMLHDGE GADVTFTVCG
201: QLFHAHRCVL AFRSPVFRAE LFGPLRENAT ECIKIDDMEP MIFEALLHFI YTDTLPDNCK DGKAAAMQHM LVAADRYGVD RLRLLCERKL SDAIDVETVS
301: TTLALAEQHH CSQLRGACIR FMASPDMLGP VMLTDGFKHL VASCPLILKE VLDEVSRIWR DKSS

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.