Factsheet for TraesCS3B01G025700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G026500.1	Wheat	mitochondrion	92.51	92.99
TraesCS3A01G020800.1	Wheat	cytosol	74.94	81.46
TraesCS3B01G026400.1	Wheat	cytosol	62.79	67.13
TraesCS5B01G042100.1	Wheat	cytosol	21.96	66.93
TraesCS3B01G060200.1	Wheat	cytosol	61.5	65.75
TraesCS2B01G384100.1	Wheat	cytosol	33.59	61.32
TraesCS5B01G042000.1	Wheat	cytosol	47.03	51.85
TraesCS2B01G574000.1	Wheat	cytosol, plastid	32.56	50.6
TraesCS5B01G042300.1	Wheat	plastid	45.74	50.43
TraesCS6B01G443900.1	Wheat	cytosol	44.96	49.57
TraesCS5B01G043200.1	Wheat	plastid	44.44	49.14
TraesCS2B01G383800.1	Wheat	mitochondrion	44.7	48.46
TraesCS1B01G111900.1	Wheat	mitochondrion, plastid	42.89	47.7
TraesCS2B01G383700.1	Wheat	mitochondrion	44.96	47.54
TraesCS7B01G422200.1	Wheat	cytosol	43.41	46.8
TraesCS2B01G383900.1	Wheat	mitochondrion	44.44	46.74
TraesCS7B01G421900.1	Wheat	cytosol	43.93	46.32
TraesCS3B01G345400.1	Wheat	cytosol	43.41	46.03
TraesCS3B01G345600.1	Wheat	cytosol, mitochondrion, plastid	43.15	46.01
TraesCS2B01G436900.1	Wheat	peroxisome	18.09	45.45
TraesCS2B01G573600.1	Wheat	cytosol	38.24	45.26
TraesCS1B01G387500.1	Wheat	cytosol, plastid	42.12	44.66
TraesCS7B01G423000.1	Wheat	cytosol, plastid	42.12	43.94
TraesCS6B01G303100.1	Wheat	cytosol	41.09	43.8
TraesCS2B01G573200.1	Wheat	cytosol	37.21	43.5
TraesCS7B01G422800.1	Wheat	cytosol, plastid	41.09	43.09
TraesCS2B01G074000.1	Wheat	cytosol	37.98	42.98
TraesCS5B01G472400.1	Wheat	cytosol	30.75	42.96
TraesCS3B01G201600.1	Wheat	cytosol	37.73	42.44
TraesCS5B01G460300.1	Wheat	cytosol	39.53	42.15
TraesCS7B01G422300.1	Wheat	cytosol	40.05	42.12
TraesCS7B01G049700.1	Wheat	cytosol	38.5	41.85
TraesCS7B01G422500.1	Wheat	cytosol	39.28	41.3
TraesCS7B01G422400.1	Wheat	cytosol	39.28	41.3
TraesCS5B01G472700.1	Wheat	cytosol	37.47	41.08
TraesCS5B01G472100.1	Wheat	cytosol	37.47	41.08
TraesCS5B01G460600.1	Wheat	cytosol	37.98	41.06
TraesCS5B01G472600.1	Wheat	cytosol	36.95	40.06
TraesCS5B01G460400.1	Wheat	cytosol	37.47	39.94
TraesCS5B01G472500.1	Wheat	cytosol	36.43	39.94
TraesCS2B01G573800.1	Wheat	plastid	27.39	38.27
TraesCS3B01G507600.1	Wheat	cytosol	28.94	38.23
TraesCS7B01G211100.1	Wheat	cytosol, plastid	35.66	37.81
TraesCS4B01G122200.1	Wheat	cytosol	35.4	37.33
TraesCS4B01G360000.1	Wheat	cytosol	33.33	36.03
TraesCS7B01G211200.1	Wheat	cytosol, mitochondrion	35.4	35.4
TraesCS2B01G495400.1	Wheat	cytosol	33.07	35.16
TraesCS2B01G496300.1	Wheat	cytosol	32.3	35.11
TraesCS2B01G492800.1	Wheat	plastid	32.56	34.9
TraesCS2B01G496200.1	Wheat	cytosol	31.52	34.86
TraesCS4B01G392200.1	Wheat	cytosol	32.04	34.54
TraesCS2B01G494000.1	Wheat	cytosol	31.78	34.45
TraesCS4B01G360400.1	Wheat	cytosol	31.52	34.37
TraesCS2B01G493600.1	Wheat	cytosol	32.04	34.35
TraesCS2B01G496400.1	Wheat	cytosol	30.75	33.71
TraesCS2B01G493500.1	Wheat	cytosol	31.01	33.24
TraesCS2B01G493100.1	Wheat	cytosol	31.52	33.15
TraesCS5B01G364400.1	Wheat	plastid	31.01	32.79
TraesCS2B01G159700.1	Wheat	mitochondrion, plastid	35.92	32.71
TraesCS7B01G211000.1	Wheat	cytosol	26.61	32.09
TraesCS2B01G494600.1	Wheat	cytosol	30.23	31.71
TraesCS2B01G496500.1	Wheat	cytosol	28.42	31.43
TraesCS2B01G262200.1	Wheat	cytosol	31.27	28.4
TraesCS5B01G431400.2	Wheat	cytosol	31.52	27.92
TraesCS2B01G493700.2	Wheat	cytosol	30.23	22.72

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS3B01G025700
EnsemblPlants:TraesCS3B01G025700.1	TIGR:cd00121	TIGR:cd14736	SEG:seg	:	:

Description

No Description!

Coordinates

chr3B:-:11113698..11127873

Molecular Weight (calculated)

42877.1 Da

IEP (calculated)

5.969

GRAVY (calculated)

-0.294

Length

387 amino acids

Sequence
(BLAST)

001: MAGSGGRCRS PPPVHSAWPA DPYATAAPNH WFEATAFPPP PPTPVAAPPP AMIGGGGGRR RDFGSNDGGE YIQSATFAIG GYDWCVRYYP DGETQDCRGY
101: VSIFLELLTR NAKVRAEYEF RLVDSGSALP PSPVTHLFTN NYNTVDPDED PARYGAHRFM KQQEVKPYVR DDCLEIECEV LVINPITKLE VQDVPPSDLP
201: NHLGKLLDGK RGADVTFEVK GEVFSAHKIM LATRSPVFDA QLYGPMRDVN ATSKNIIIKD MEAPVFKALL HFIYTDSLPA MDDIDDGESQ DMVKHLLVAA
301: DRYAMDRMKM MCEDILCKSF DVETVATTLA LADQHHCSKL KYACVEYILS SNRVNAVVAS KGYAHLKRSC PAVMFDVFER ATKSRKI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.