Factsheet for TraesCS6B01G443900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G401700.1	Wheat	cytosol, mitochondrion, plastid	94.87	94.87
TraesCS5B01G042100.1	Wheat	cytosol	29.63	81.89
TraesCS5B01G042300.1	Wheat	plastid	69.23	69.23
TraesCS5B01G042000.1	Wheat	cytosol	68.66	68.66
TraesCS5B01G043200.1	Wheat	plastid	68.09	68.29
TraesCS2B01G384100.1	Wheat	cytosol	35.61	58.96
TraesCS2B01G574000.1	Wheat	cytosol, plastid	37.32	52.61
TraesCS3B01G026400.1	Wheat	cytosol	53.56	51.93
TraesCS2B01G383900.1	Wheat	mitochondrion	54.42	51.9
TraesCS2B01G383700.1	Wheat	mitochondrion	53.85	51.64
TraesCS3B01G060200.1	Wheat	cytosol	52.71	51.1
TraesCS2B01G383800.1	Wheat	mitochondrion	51.85	50.98
TraesCS2B01G436900.1	Wheat	peroxisome	22.22	50.65
TraesCS1B01G111900.1	Wheat	mitochondrion, plastid	48.43	48.85
TraesCS3B01G345400.1	Wheat	cytosol	50.14	48.22
TraesCS3B01G345600.1	Wheat	cytosol, mitochondrion, plastid	49.0	47.38
TraesCS7B01G422200.1	Wheat	cytosol	48.43	47.35
TraesCS7B01G421900.1	Wheat	cytosol	48.72	46.59
TraesCS2B01G573200.1	Wheat	cytosol	43.3	45.92
TraesCS7B01G423000.1	Wheat	cytosol, plastid	48.43	45.82
TraesCS1B01G387500.1	Wheat	cytosol, plastid	47.58	45.75
TraesCS6B01G303100.1	Wheat	cytosol	47.29	45.73
TraesCS2B01G573600.1	Wheat	cytosol	42.17	45.26
TraesCS3B01G025700.1	Wheat	cytosol	49.57	44.96
TraesCS7B01G422400.1	Wheat	cytosol	45.87	43.75
TraesCS7B01G422300.1	Wheat	cytosol	45.87	43.75
TraesCS7B01G422800.1	Wheat	cytosol, plastid	45.58	43.36
TraesCS7B01G422500.1	Wheat	cytosol	44.73	42.66
TraesCS7B01G049700.1	Wheat	cytosol	42.73	42.13
TraesCS3B01G201600.1	Wheat	cytosol	40.74	41.57
TraesCS2B01G573800.1	Wheat	plastid	32.19	40.79
TraesCS2B01G074000.1	Wheat	cytosol	39.32	40.35
TraesCS5B01G460300.1	Wheat	cytosol	41.6	40.22
TraesCS5B01G460400.1	Wheat	cytosol	41.31	39.94
TraesCS4B01G122200.1	Wheat	cytosol	41.31	39.51
TraesCS5B01G472400.1	Wheat	cytosol	31.05	39.35
TraesCS5B01G472600.1	Wheat	cytosol	39.6	38.94
TraesCS3B01G507600.1	Wheat	cytosol	32.48	38.91
TraesCS5B01G460600.1	Wheat	cytosol	39.6	38.83
TraesCS5B01G472700.1	Wheat	cytosol	39.03	38.81
TraesCS5B01G472100.1	Wheat	cytosol	39.03	38.81
TraesCS5B01G472500.1	Wheat	cytosol	38.46	38.24
TraesCS2B01G492800.1	Wheat	plastid	37.32	36.29
TraesCS7B01G211100.1	Wheat	cytosol, plastid	37.61	36.16
TraesCS4B01G360400.1	Wheat	cytosol	36.47	36.06
TraesCS2B01G493600.1	Wheat	cytosol	37.04	36.01
TraesCS2B01G494000.1	Wheat	cytosol	36.47	35.85
TraesCS2B01G496400.1	Wheat	cytosol	35.9	35.69
TraesCS4B01G392200.1	Wheat	cytosol	36.18	35.38
TraesCS2B01G495400.1	Wheat	cytosol	36.47	35.16
TraesCS4B01G360000.1	Wheat	cytosol	35.33	34.64
TraesCS2B01G493500.1	Wheat	cytosol	35.61	34.63
TraesCS2B01G494600.1	Wheat	cytosol	35.9	34.15
TraesCS7B01G211200.1	Wheat	cytosol, mitochondrion	37.61	34.11
TraesCS2B01G493100.1	Wheat	cytosol	35.61	33.97
TraesCS2B01G496300.1	Wheat	cytosol	33.9	33.43
TraesCS5B01G364400.1	Wheat	plastid	34.47	33.06
TraesCS2B01G496200.1	Wheat	cytosol	32.76	32.86
TraesCS2B01G496500.1	Wheat	cytosol	32.19	32.29
TraesCS7B01G211000.1	Wheat	cytosol	28.77	31.46
TraesCS2B01G159700.1	Wheat	mitochondrion, plastid	36.47	30.12
TraesCS2B01G262200.1	Wheat	cytosol	35.04	28.87
TraesCS5B01G431400.2	Wheat	cytosol	35.04	28.15
TraesCS2B01G493700.2	Wheat	cytosol	31.62	21.55

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211
InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
EnsemblPlantsGene:TraesCS6B01G443900	EnsemblPlants:TraesCS6B01G443900.1	TIGR:cd00121	TIGR:cd14736	:	:

Description

No Description!

Coordinates

chr6B:+:706868694..706869749

Molecular Weight (calculated)

39902.5 Da

IEP (calculated)

6.320

GRAVY (calculated)

-0.046

Length

351 amino acids

Sequence
(BLAST)

001: MDASQGSIVR VPSRRTQETT EATVAFEIAG YSLLKGLDRG EFLYSPPFFT NGYEWCILYY PDGSGDERSQ GFASVFLKLL TKNALVRAFY KLWHLDAVRG
101: HIIKPVFSSQ VTNVFGPKSP SWGFEKFMKT TELMYVRNDC LVMEWEVRII KETLEIKVPP SELSDNLATL LEGKKGADVT FKVQGEIFFA HKILLAMRSA
201: VFDAKFYGPM AMGEKESQDI TIDDMQPPVF KAFLHFIYTD SLPSMVDLDD NDKIEMVKHL LVAADKYAME RMKVICEGML CKSLDVETVA TILALAEQYH
301: CSNLKDACIE FILSSNRMND VLASQGYLHL KRSFPHIIVD LFERTVKSRK I

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.