Factsheet for TraesCS5B01G042300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G042100.1	Wheat	cytosol	35.33	97.64
TraesCS5A01G040900.1	Wheat	cytosol	60.4	94.22
TraesCS5D01G048000.1	Wheat	cytosol	80.06	81.92
HORVU0Hr1G010120.1	Barley	plastid	78.35	77.9
TraesCS5B01G042000.1	Wheat	cytosol	76.07	76.07
TraesCS5B01G043200.1	Wheat	plastid	74.36	74.57
TraesCS6B01G443900.1	Wheat	cytosol	69.23	69.23
TraesCS2B01G384100.1	Wheat	cytosol	34.19	56.6
TraesCS2B01G383700.1	Wheat	mitochondrion	57.55	55.19
TraesCS2B01G383900.1	Wheat	mitochondrion	56.7	54.08
TraesCS2B01G383800.1	Wheat	mitochondrion	53.85	52.94
TraesCS3B01G026400.1	Wheat	cytosol	54.13	52.49
TraesCS3B01G060200.1	Wheat	cytosol	53.56	51.93
TraesCS2B01G574000.1	Wheat	cytosol, plastid	36.47	51.41
TraesCS7B01G421900.1	Wheat	cytosol	52.42	50.14
TraesCS1B01G111900.1	Wheat	mitochondrion, plastid	49.57	50.0
TraesCS7B01G422200.1	Wheat	cytosol	50.43	49.3
TraesCS2B01G436900.1	Wheat	peroxisome	21.37	48.7
TraesCS3B01G345400.1	Wheat	cytosol	49.57	47.67
TraesCS3B01G345600.1	Wheat	cytosol, mitochondrion, plastid	49.29	47.66
TraesCS7B01G423000.1	Wheat	cytosol, plastid	49.57	46.9
TraesCS2B01G573200.1	Wheat	cytosol	44.16	46.83
TraesCS2B01G573600.1	Wheat	cytosol	43.59	46.79
TraesCS7B01G422800.1	Wheat	cytosol, plastid	49.0	46.61
TraesCS6B01G303100.1	Wheat	cytosol	47.86	46.28
TraesCS1B01G387500.1	Wheat	cytosol, plastid	47.86	46.03
TraesCS3B01G025700.1	Wheat	cytosol	50.43	45.74
TraesCS7B01G422300.1	Wheat	cytosol	47.01	44.84
TraesCS7B01G049700.1	Wheat	cytosol	45.01	44.38
TraesCS3B01G507600.1	Wheat	cytosol	36.75	44.03
TraesCS7B01G422400.1	Wheat	cytosol	46.15	44.02
TraesCS7B01G422500.1	Wheat	cytosol	45.87	43.75
TraesCS2B01G573800.1	Wheat	plastid	34.19	43.32
TraesCS3B01G201600.1	Wheat	cytosol	41.88	42.73
TraesCS2B01G074000.1	Wheat	cytosol	41.6	42.69
TraesCS5B01G460400.1	Wheat	cytosol	43.87	42.42
TraesCS5B01G460600.1	Wheat	cytosol	42.73	41.9
TraesCS5B01G472600.1	Wheat	cytosol	42.45	41.74
TraesCS5B01G472700.1	Wheat	cytosol	41.31	41.08
TraesCS5B01G472500.1	Wheat	cytosol	41.31	41.08
TraesCS4B01G122200.1	Wheat	cytosol	42.73	40.87
TraesCS5B01G472100.1	Wheat	cytosol	41.03	40.79
TraesCS5B01G460300.1	Wheat	cytosol	42.17	40.77
TraesCS5B01G472400.1	Wheat	cytosol	31.62	40.07
TraesCS7B01G211100.1	Wheat	cytosol, plastid	40.17	38.63
TraesCS4B01G360400.1	Wheat	cytosol	38.18	37.75
TraesCS4B01G360000.1	Wheat	cytosol	37.61	36.87
TraesCS2B01G493600.1	Wheat	cytosol	37.89	36.84
TraesCS2B01G492800.1	Wheat	plastid	37.32	36.29
TraesCS2B01G494000.1	Wheat	cytosol	35.9	35.29
TraesCS5B01G364400.1	Wheat	plastid	36.75	35.25
TraesCS2B01G493500.1	Wheat	cytosol	35.9	34.9
TraesCS7B01G211200.1	Wheat	cytosol, mitochondrion	38.18	34.63
TraesCS2B01G495400.1	Wheat	cytosol	35.9	34.62
TraesCS2B01G496200.1	Wheat	cytosol	34.47	34.57
TraesCS2B01G496400.1	Wheat	cytosol	34.76	34.56
TraesCS2B01G493100.1	Wheat	cytosol	36.18	34.51
TraesCS4B01G392200.1	Wheat	cytosol	35.04	34.26
TraesCS7B01G211000.1	Wheat	cytosol	30.48	33.33
TraesCS2B01G496300.1	Wheat	cytosol	33.62	33.15
TraesCS2B01G494600.1	Wheat	cytosol	34.47	32.79
TraesCS2B01G496500.1	Wheat	cytosol	31.91	32.0
TraesCS2B01G159700.1	Wheat	mitochondrion, plastid	37.61	31.06
TraesCS2B01G262200.1	Wheat	cytosol	35.61	29.34
TraesCS5B01G431400.2	Wheat	cytosol	35.9	28.83
TraesCS2B01G493700.2	Wheat	cytosol	33.33	22.72

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379
PANTHER:PTHR26379:SF211	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
EnsemblPlantsGene:TraesCS5B01G042300	EnsemblPlants:TraesCS5B01G042300.1	TIGR:cd00121	TIGR:cd14736	:	:

Description

No Description!

Coordinates

chr5B:-:46767023..46769943

Molecular Weight (calculated)

39139.3 Da

IEP (calculated)

5.509

GRAVY (calculated)

-0.106

Length

351 amino acids

Sequence
(BLAST)

001: MAASQGSISR MPSRCTAETA RATVAFEIAG YRLLKGHGRG KCLRSPAFSI GGYEWRIRYY PDGNQSEAAE GYVSLFLELL TEKAEVRATF NFMIVEPVER
101: KSILVCSFKE PLVFDPERSS WGVTNFMKTT TEVESVYLRN DCLVIECEVS VIKETLEVHV PPSRLVDNLA KLLEGKKGAD VTFKVQGEVF SAHKVLLATQ
201: SAVFDAEFYG PMGGKGAQDI TIDGMQPAVF KSFLHFIYTD SMPSMDDLED DDKREMVKHL LVAADKYAME RMKLICEGML CKSLDVENVA TILALADQHN
301: CSNLKDACME FMLSSNRMND VIASQGYVQL KRSSPDIIVD VLERAAKSRK I

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.