Factsheet for TraesCS1B01G111900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

mitochondrion 4
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	90.52	90.52
TraesCS1A01G101100.1	Wheat	mitochondrion, plastid	88.79	88.79
HORVU1Hr1G020270.1	Barley	mitochondrion, plastid	83.62	83.38
TraesCS5B01G042100.1	Wheat	cytosol	25.0	68.5
TraesCS2B01G384100.1	Wheat	cytosol	37.93	62.26
TraesCS1B01G387500.1	Wheat	cytosol, plastid	63.79	60.82
TraesCS2B01G383700.1	Wheat	mitochondrion	55.75	53.01
TraesCS2B01G383900.1	Wheat	mitochondrion	55.75	52.72
TraesCS3B01G026400.1	Wheat	cytosol	54.6	52.49
TraesCS2B01G574000.1	Wheat	cytosol, plastid	37.36	52.21
TraesCS2B01G436900.1	Wheat	peroxisome	22.99	51.95
TraesCS2B01G383800.1	Wheat	mitochondrion	52.87	51.54
TraesCS3B01G060200.1	Wheat	cytosol	53.16	51.1
TraesCS7B01G422200.1	Wheat	cytosol	52.3	50.7
TraesCS5B01G042000.1	Wheat	cytosol	50.57	50.14
TraesCS3B01G345400.1	Wheat	cytosol	52.01	49.59
TraesCS5B01G042300.1	Wheat	plastid	50.0	49.57
TraesCS5B01G043200.1	Wheat	plastid	49.71	49.43
TraesCS7B01G421900.1	Wheat	cytosol	52.01	49.32
TraesCS3B01G345600.1	Wheat	cytosol, mitochondrion, plastid	51.15	49.04
TraesCS7B01G423000.1	Wheat	cytosol, plastid	52.01	48.79
TraesCS2B01G573200.1	Wheat	cytosol	46.26	48.64
TraesCS2B01G573600.1	Wheat	cytosol	45.69	48.62
TraesCS6B01G443900.1	Wheat	cytosol	48.85	48.43
TraesCS7B01G422800.1	Wheat	cytosol, plastid	50.86	47.97
TraesCS6B01G303100.1	Wheat	cytosol	49.71	47.66
TraesCS2B01G074000.1	Wheat	cytosol	45.4	46.2
TraesCS3B01G201600.1	Wheat	cytosol	45.11	45.64
TraesCS5B01G460400.1	Wheat	cytosol	47.41	45.45
TraesCS5B01G460300.1	Wheat	cytosol	47.13	45.18
TraesCS5B01G472400.1	Wheat	cytosol	35.92	45.13
TraesCS4B01G122200.1	Wheat	cytosol	47.13	44.69
TraesCS5B01G472600.1	Wheat	cytosol	45.69	44.54
TraesCS5B01G472500.1	Wheat	cytosol	44.83	44.19
TraesCS3B01G507600.1	Wheat	cytosol	37.07	44.03
TraesCS7B01G422500.1	Wheat	cytosol	46.55	44.02
TraesCS5B01G460600.1	Wheat	cytosol	45.11	43.85
TraesCS7B01G049700.1	Wheat	cytosol	44.83	43.82
TraesCS7B01G422400.1	Wheat	cytosol	46.26	43.75
TraesCS7B01G422300.1	Wheat	cytosol	46.26	43.75
TraesCS5B01G472100.1	Wheat	cytosol	43.97	43.34
TraesCS5B01G472700.1	Wheat	cytosol	43.97	43.34
TraesCS2B01G573800.1	Wheat	plastid	34.48	43.32
TraesCS3B01G025700.1	Wheat	cytosol	47.7	42.89
TraesCS7B01G211100.1	Wheat	cytosol, plastid	41.38	39.45
TraesCS2B01G495400.1	Wheat	cytosol	39.66	37.91
TraesCS7B01G211200.1	Wheat	cytosol, mitochondrion	41.67	37.47
TraesCS4B01G360400.1	Wheat	cytosol	37.36	36.62
TraesCS4B01G360000.1	Wheat	cytosol	37.64	36.59
TraesCS4B01G392200.1	Wheat	cytosol	36.49	35.38
TraesCS2B01G159700.1	Wheat	mitochondrion, plastid	42.82	35.06
TraesCS2B01G494000.1	Wheat	cytosol	35.92	35.01
TraesCS5B01G364400.1	Wheat	plastid	36.78	34.97
TraesCS2B01G492800.1	Wheat	plastid	36.21	34.9
TraesCS2B01G496300.1	Wheat	cytosol	35.34	34.55
TraesCS2B01G493600.1	Wheat	cytosol	35.63	34.35
TraesCS7B01G211000.1	Wheat	cytosol	31.61	34.27
TraesCS2B01G496200.1	Wheat	cytosol	33.91	33.71
TraesCS2B01G493500.1	Wheat	cytosol	34.77	33.52
TraesCS2B01G494600.1	Wheat	cytosol	35.34	33.33
TraesCS2B01G493100.1	Wheat	cytosol	34.48	32.61
TraesCS2B01G496400.1	Wheat	cytosol	33.05	32.58
TraesCS2B01G496500.1	Wheat	cytosol	32.76	32.57
TraesCS2B01G262200.1	Wheat	cytosol	39.66	32.39
TraesCS5B01G431400.2	Wheat	cytosol	38.51	30.66
TraesCS2B01G493700.2	Wheat	cytosol	34.2	23.11

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS1B01G111900
EnsemblPlants:TraesCS1B01G111900.1	TIGR:cd00121	TIGR:cd14736	SEG:seg	:	:

Description

No Description!

Coordinates

chr1B:+:130010109..130011155

Molecular Weight (calculated)

38860.6 Da

IEP (calculated)

5.033

GRAVY (calculated)

-0.086

Length

348 amino acids

Sequence
(BLAST)

001: MRTASMCTAS TVRGTHTFKI AGFSLHRGLG VGNFIPSATF DIGGYLWRVL FYPDGEMEME NGDHASVFLD LVSKATEVRA LFEVRLVDQT NKLPPSVVLS
101: QKTPYVFNNT EHSNSVGDDF LQPLGYLLDD SLVLECDVTV LTESKVTLTA TTFDIQVPPS DLGEHFRELL EKEEEADVLF DVEGVVFPAH KIVVAGRSPV
201: FKAQLFGPMS DRTRRHITIE DMQPAVFRAL LHFIYTDSLP SMEKLDGDEG KEMIKHLLVA ADRYAMERMK VMCESILCKS LDVENATATL ALADQHHCSN
301: LRDACLEFIT SPDRMDDVMA SQGYTHLKRS CPSIVIDVFE GAKRSRKI

Best Arabidopsis Sequence Match ( AT3G06190.1 )
(BLAST)

001: MDTIRVSKEV PGSSKSTAQS LTESTSRTET INGSHEFKIS GYSLVKGMGI GKYVASDTFM VGGYSWAIYF YPDGKSPEDN SVYVSLFIAL ASEGADVRAL
101: FELTLVDQSG NERHKVHSHF GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN IPVPVSGLGQ QFGKLLESGK
201: GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR
301: TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKAVME TDGFDYLKES CPSLLSELLE YVARLSEHSL TSSGHRKELF ADGCDLNGRR
401: VKQRLH

Arabidopsis Description

BPM2BTB/POZ and MATH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.