Factsheet for TraesCS1A01G101100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	89.66	89.66
TraesCS1B01G111900.1	Wheat	mitochondrion, plastid	88.79	88.79
HORVU1Hr1G020270.1	Barley	mitochondrion, plastid	86.21	85.96
TraesCS2A01G508000.1	Wheat	cytosol	25.86	64.29
TraesCS5A01G452100.1	Wheat	cytosol	22.99	61.54
TraesCS1A01G368600.1	Wheat	mitochondrion	59.77	59.77
TraesCS5A01G040900.1	Wheat	cytosol	37.93	58.67
TraesCS7A01G511200.1	Wheat	cytosol	24.43	54.84
TraesCS7A01G026200.1	Wheat	mitochondrion	50.57	54.15
TraesCS2A01G458500.1	Wheat	cytosol	20.69	54.14
TraesCS5A01G462000.1	Wheat	cytosol	27.01	53.71
TraesCS5A01G041400.1	Wheat	plastid	53.74	53.12
TraesCS3A01G019700.1	Wheat	cytosol	55.17	53.04
TraesCS4A01G462500.1	Wheat	mitochondrion	53.74	52.53
TraesCS5A01G040800.1	Wheat	cytosol	52.3	52.15
TraesCS7A01G511400.1	Wheat	cytosol	53.16	50.96
TraesCS3A01G020800.1	Wheat	cytosol	52.01	50.84
TraesCS3A01G020200.1	Wheat	cytosol	52.3	50.84
TraesCS2A01G543300.1	Wheat	cytosol	48.85	50.75
TraesCS2A01G458700.1	Wheat	cytosol	21.26	50.68
TraesCS3A01G320300.1	Wheat	cytosol	51.44	50.42
TraesCS5A01G041300.1	Wheat	cytosol	50.86	50.28
TraesCS6A01G401700.1	Wheat	cytosol, mitochondrion, plastid	49.43	49.0
TraesCS7A01G311400.1	Wheat	cytosol	25.57	48.9
TraesCS2A01G366500.1	Wheat	cytosol	50.29	48.88
TraesCS7A01G511000.1	Wheat	mitochondrion, plastid	33.62	47.37
TraesCS3A01G164400.1	Wheat	cytosol	33.62	47.37
TraesCS6A01G275800.1	Wheat	cytosol	50.29	47.04
TraesCS5A01G451500.1	Wheat	cytosol	48.28	46.28
TraesCS5A01G451900.1	Wheat	cytosol	47.7	46.24
TraesCS4A01G193000.1	Wheat	cytosol	47.41	45.58
TraesCS2A01G217100.1	Wheat	cytosol	45.98	44.44
TraesCS5A01G451600.1	Wheat	cytosol	44.25	44.13
TraesCS3A01G212400.1	Wheat	cytosol	43.39	43.9
TraesCS5A01G461800.1	Wheat	cytosol	42.53	43.79
TraesCS7A01G511500.1	Wheat	cytosol	45.98	43.48
TraesCS2A01G418000.1	Wheat	cytosol	45.4	43.05
TraesCS5A01G041000.1	Wheat	cytosol, mitochondrion, plastid	49.71	42.82
TraesCS2A01G418100.1	Wheat	cytosol	44.83	42.39
TraesCS2A01G472600.1	Wheat	cytosol	39.66	40.59
TraesCS5A01G528500.1	Wheat	cytosol	35.92	39.43
TraesCS2A01G472700.1	Wheat	cytosol	41.09	39.29
TraesCS2A01G471000.1	Wheat	cytosol	26.72	39.08
TraesCS7A01G550800.1	Wheat	cytosol	30.46	38.97
TraesCS5A01G528600.1	Wheat	cytosol	39.66	38.76
TraesCS2A01G473400.1	Wheat	cytosol	34.48	38.1
TraesCS6A01G167500.1	Wheat	plastid	36.21	37.72
TraesCS4A01G465200.1	Wheat	cytosol	35.92	37.09
TraesCS2A01G470900.1	Wheat	cytosol	38.22	36.94
TraesCS4A01G465700.1	Wheat	cytosol	37.36	36.31
TraesCS2A01G470000.1	Wheat	plastid	37.07	36.13
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	43.97	36.0
TraesCS2A01G470400.1	Wheat	cytosol	36.49	35.18
TraesCS2A01G473300.1	Wheat	cytosol	29.89	35.14
TraesCS2A01G255800.1	Wheat	cytosol	39.37	34.6
TraesCS5A01G554900.1	Wheat	cytosol	35.63	34.54
TraesCS2A01G470700.1	Wheat	cytosol, plastid	36.78	34.5
TraesCS2A01G473500.1	Wheat	cytosol	34.48	34.29
TraesCS5A01G361900.1	Wheat	cytosol	35.06	33.98
TraesCS2A01G543600.1	Wheat	plastid	26.15	33.96
TraesCS2A01G237800.1	Wheat	cytosol	39.66	32.39
TraesCS5A01G429400.2	Wheat	cytosol	38.22	30.43
TraesCS2A01G471800.1	Wheat	mitochondrion	35.06	26.99
TraesCS2A01G471700.1	Wheat	cytosol	29.89	24.82

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS1A01G101100
EnsemblPlants:TraesCS1A01G101100.1	TIGR:cd00121	TIGR:cd14736	:	:	:

Description

No Description!

Coordinates

chr1A:+:97792809..97793855

Molecular Weight (calculated)

38881.7 Da

IEP (calculated)

4.943

GRAVY (calculated)

-0.095

Length

348 amino acids

Sequence
(BLAST)

001: MRTASMCTAC TVRGTHTFKI AGYSLHRGLG VGNFIPSASF DIGGYLWRVL YFPDGETEME NGDHASVFLD LVSKATEVRA LFEVRLVDQT NKLPPSVVLS
101: QKTPIMFNNN EHRNSMGDDF LQPLAYLLDD SLVLECDVTV LKEFKVTLTV TTFDIQVPPS DLGEHLREFL ENGEGADVVF EVEGEVFPAH KSVVAGRSPV
201: FRAQLFGPMS DRAKQRITVE DMQPAVFKAL LHFIYTDSLP SMEDLDGDEG KEMVKHLLVA ADRYAMERMK VMCESILCNS LDVESVTATL ALADQHHCSN
301: LRDACLEFIT SPDRMDDVMA TQGYAHLKRS CPSIVIDVFE RAKRSRKI

Best Arabidopsis Sequence Match ( AT3G06190.1 )
(BLAST)

001: MDTIRVSKEV PGSSKSTAQS LTESTSRTET INGSHEFKIS GYSLVKGMGI GKYVASDTFM VGGYSWAIYF YPDGKSPEDN SVYVSLFIAL ASEGADVRAL
101: FELTLVDQSG NERHKVHSHF GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN IPVPVSGLGQ QFGKLLESGK
201: GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR
301: TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKAVME TDGFDYLKES CPSLLSELLE YVARLSEHSL TSSGHRKELF ADGCDLNGRR
401: VKQRLH

Arabidopsis Description

BPM2BTB/POZ and MATH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.