Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G266900.1 | Wheat | cytosol | 99.49 | 99.49 |
| HORVU2Hr1G064920.1 | Barley | plastid | 95.2 | 87.67 |
| Os07t0101400-01 | Rice | cytosol | 86.11 | 86.33 |
| EER97813 | Sorghum | plastid | 81.57 | 80.35 |
| GSMUA_Achr7P10650_001 | Banana | cytosol | 68.69 | 67.16 |
| Zm00001d007888_P002 | Maize | plastid | 72.22 | 66.51 |
| VIT_13s0019g02260.t01 | Wine grape | cytosol | 66.16 | 64.53 |
| GSMUA_Achr10P... | Banana | cytosol | 29.8 | 62.43 |
| Solyc05g052960.2.1 | Tomato | cytosol | 63.89 | 62.01 |
| PGSC0003DMT400069942 | Potato | cytosol | 63.64 | 61.76 |
| KRG97837 | Soybean | cytosol | 62.12 | 59.42 |
| KRH31032 | Soybean | nucleus | 62.12 | 59.28 |
| Bra000147.1-P | Field mustard | cytosol | 57.07 | 59.16 |
| CDX93238 | Canola | cytosol | 59.09 | 59.09 |
| Bra017053.1-P | Field mustard | cytosol | 59.09 | 58.65 |
| CDY07031 | Canola | cytosol | 58.84 | 58.4 |
| CDY07638 | Canola | cytosol | 57.83 | 57.25 |
| AT2G39760.1 | Thale cress | cytosol | 58.33 | 56.62 |
| CDY61778 | Canola | cytosol | 57.58 | 54.03 |
| TraesCS2A01G135800.1 | Wheat | mitochondrion, plastid | 55.56 | 51.76 |
| TraesCS2A01G237800.1 | Wheat | cytosol | 53.79 | 50.0 |
| TraesCS5A01G429400.2 | Wheat | cytosol | 54.55 | 49.43 |
| TraesCS5A01G452100.1 | Wheat | cytosol | 13.64 | 41.54 |
| TraesCS7A01G311400.1 | Wheat | cytosol | 18.94 | 41.21 |
| TraesCS5A01G462000.1 | Wheat | cytosol | 18.18 | 41.14 |
| TraesCS5A01G528500.1 | Wheat | cytosol | 32.07 | 40.06 |
| TraesCS1A01G101100.1 | Wheat | mitochondrion, plastid | 34.6 | 39.37 |
| TraesCS2A01G472700.1 | Wheat | cytosol | 36.11 | 39.29 |
| TraesCS7A01G026200.1 | Wheat | mitochondrion | 32.07 | 39.08 |
| TraesCS3A01G019700.1 | Wheat | cytosol | 35.1 | 38.4 |
| TraesCS4A01G465200.1 | Wheat | cytosol | 32.58 | 38.28 |
| TraesCS4A01G465700.1 | Wheat | cytosol | 34.6 | 38.27 |
| TraesCS7A01G511200.1 | Wheat | cytosol | 14.9 | 38.06 |
| TraesCS5A01G528600.1 | Wheat | cytosol | 34.09 | 37.92 |
| TraesCS2A01G543300.1 | Wheat | cytosol | 32.07 | 37.91 |
| TraesCS5A01G554900.1 | Wheat | cytosol | 34.34 | 37.88 |
| TraesCS3A01G320300.1 | Wheat | cytosol | 33.84 | 37.75 |
| TraesCS3A01G020800.1 | Wheat | cytosol | 33.84 | 37.64 |
| TraesCS3A01G020200.1 | Wheat | cytosol | 33.84 | 37.43 |
| TraesCS2A01G472600.1 | Wheat | cytosol | 32.07 | 37.35 |
| TraesCS4A01G193000.1 | Wheat | cytosol | 34.09 | 37.29 |
| TraesCS2A01G470000.1 | Wheat | plastid | 33.33 | 36.97 |
| TraesCS4A01G462500.1 | Wheat | mitochondrion | 33.08 | 36.8 |
| TraesCS2A01G471000.1 | Wheat | cytosol | 21.97 | 36.55 |
| TraesCS2A01G473400.1 | Wheat | cytosol | 29.04 | 36.51 |
| TraesCS2A01G508000.1 | Wheat | cytosol | 12.88 | 36.43 |
| TraesCS5A01G041400.1 | Wheat | plastid | 32.32 | 36.36 |
| CDX93236 | Canola | cytosol | 37.37 | 36.27 |
| TraesCS5A01G361900.1 | Wheat | cytosol | 32.58 | 35.93 |
| TraesCS5A01G451500.1 | Wheat | cytosol | 32.83 | 35.81 |
| TraesCS7A01G511400.1 | Wheat | cytosol | 32.83 | 35.81 |
| TraesCS5A01G041300.1 | Wheat | cytosol | 31.82 | 35.8 |
| TraesCS2A01G470400.1 | Wheat | cytosol | 32.58 | 35.73 |
| TraesCS5A01G040900.1 | Wheat | cytosol | 20.2 | 35.56 |
| TraesCS5A01G040800.1 | Wheat | cytosol | 31.06 | 35.24 |
| TraesCS2A01G470900.1 | Wheat | cytosol | 31.82 | 35.0 |
| TraesCS5A01G461800.1 | Wheat | cytosol | 29.8 | 34.91 |
| TraesCS5A01G451900.1 | Wheat | cytosol | 31.57 | 34.82 |
| TraesCS3A01G164400.1 | Wheat | cytosol | 21.72 | 34.82 |
| TraesCS2A01G470700.1 | Wheat | cytosol, plastid | 32.58 | 34.77 |
| TraesCS1A01G368600.1 | Wheat | mitochondrion | 30.56 | 34.77 |
| TraesCS2A01G366500.1 | Wheat | cytosol | 31.31 | 34.64 |
| TraesCS2A01G458500.1 | Wheat | cytosol | 11.62 | 34.59 |
| TraesCS6A01G275800.1 | Wheat | cytosol | 32.32 | 34.41 |
| TraesCS5A01G451600.1 | Wheat | cytosol | 30.3 | 34.38 |
| TraesCS6A01G401700.1 | Wheat | cytosol, mitochondrion, plastid | 30.3 | 34.19 |
| TraesCS2A01G418000.1 | Wheat | cytosol | 31.31 | 33.79 |
| TraesCS2A01G473300.1 | Wheat | cytosol | 25.25 | 33.78 |
| TraesCS2A01G458700.1 | Wheat | cytosol | 12.37 | 33.56 |
| TraesCS2A01G418100.1 | Wheat | cytosol | 31.06 | 33.42 |
| TraesCS6A01G167500.1 | Wheat | plastid | 28.03 | 33.23 |
| TraesCS3A01G212400.1 | Wheat | cytosol | 28.79 | 33.14 |
| TraesCS2A01G217100.1 | Wheat | cytosol | 30.05 | 33.06 |
| TraesCS7A01G511000.1 | Wheat | mitochondrion, plastid | 20.2 | 32.39 |
| TraesCS7A01G550800.1 | Wheat | cytosol | 22.22 | 32.35 |
| TraesCS2A01G473500.1 | Wheat | cytosol | 28.54 | 32.29 |
| TraesCS7A01G511500.1 | Wheat | cytosol | 29.04 | 31.25 |
| TraesCS5A01G041000.1 | Wheat | cytosol, mitochondrion, plastid | 31.82 | 31.19 |
| TraesCS2A01G543600.1 | Wheat | plastid | 20.2 | 29.85 |
| TraesCS2A01G471700.1 | Wheat | cytosol | 30.05 | 28.4 |
| TraesCS2A01G471800.1 | Wheat | mitochondrion | 31.57 | 27.65 |
Protein Annotations
| Gene3D:1.25.40.420 | Gene3D:2.60.210.10 | Gene3D:3.30.710.10 | MapMan:35.1 | InterPro:BPM_C | InterPro:BTB/POZ_dom |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006464 | GO:GO:0006950 | GO:GO:0006970 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0031396 |
| GO:GO:0042802 | GO:GO:0071472 | InterPro:IPR000210 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom |
| PFAM:PF00651 | PFscan:PS50097 | PFscan:PS50144 | PANTHER:PTHR24411 | PANTHER:PTHR24411:SF54 | InterPro:SKP1/BTB/POZ_sf |
| SMART:SM00061 | SMART:SM00225 | SUPFAM:SSF49599 | SUPFAM:SSF54695 | InterPro:TRAF-like | EnsemblPlantsGene:TraesCS2A01G255800 |
| EnsemblPlants:TraesCS2A01G255800.1 | TIGR:cd00121 | TIGR:cd14736 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2A:-:391896556..391904740
Molecular Weight (calculated)
44284.7 Da
IEP (calculated)
6.641
GRAVY (calculated)
-0.218
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVPRPSWSR SVTETVRGSH QYTVKGFSLA KGIGPGRHLS SDTFAVGGYD WAVYLYPDGK NHEDNASYVS VFVALASEGT DVRALFELTL LDQSGRARHK
101: VHSHFDRSMQ AGPYTLKYRG SMWGYKRFYR RTQLEASDFL KDDCLVMNCT VGVVKNRLET PKNIQINVPP SDIGRCFKEL FELHIGCDIT FEVGDEKVQA
201: HKWILAARSP VFKAQFFGPI GKPDMDRVVV EDVEPIVFKA MVNFIYSDEL PSIHEVAGSF SMWTSTVVTQ HLLAAADRYG LDRLRILCEA KLCDELTSET
301: VATTLALAEQ HHCAQLKSAC LKFTAVRQNL GAVMETEGFN YLEETCPSLL SDLLATVAVV DDDPSSVNRK RGVCINEDVN PVESVEASDR RTRRRV
101: VHSHFDRSMQ AGPYTLKYRG SMWGYKRFYR RTQLEASDFL KDDCLVMNCT VGVVKNRLET PKNIQINVPP SDIGRCFKEL FELHIGCDIT FEVGDEKVQA
201: HKWILAARSP VFKAQFFGPI GKPDMDRVVV EDVEPIVFKA MVNFIYSDEL PSIHEVAGSF SMWTSTVVTQ HLLAAADRYG LDRLRILCEA KLCDELTSET
301: VATTLALAEQ HHCAQLKSAC LKFTAVRQNL GAVMETEGFN YLEETCPSLL SDLLATVAVV DDDPSSVNRK RGVCINEDVN PVESVEASDR RTRRRV
001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS
Arabidopsis Description
BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.