Factsheet for TraesCS2D01G379500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G383200.1	Wheat	cytosol	97.56	97.56
TraesCS2B01G400400.1	Wheat	cytosol	97.56	96.39
HORVU2Hr1G089140.1	Barley	cytosol	91.46	90.36
Os04t0684600-01	Rice	cytosol	71.95	72.84
TraesCS7D01G324300.1	Wheat	cytosol	53.66	67.69
TraesCS2D01G597400.1	Wheat	cytosol, plastid	63.41	61.18
Zm00001d001776_P001	Maize	cytosol, plastid	58.54	60.0
GSMUA_Achr8P07800_001	Banana	cytosol, extracellular	32.93	54.0
EES11682	Sorghum	cytosol, plastid	56.1	48.94
Solyc10g083140.1.1	Tomato	plastid	35.37	42.65
KRG96232	Soybean	nucleus, plastid	50.0	37.61
KRH67976	Soybean	nucleus, plastid	48.78	36.7
AT5G06270.1	Thale cress	mitochondrion, plastid	51.22	34.43
KRH22649	Soybean	cytosol	28.05	34.33
CDY47258	Canola	plastid	48.78	33.06
Bra005888.1-P	Field mustard	plastid	48.78	33.06
KRH30377	Soybean	plastid	43.9	32.73
AT3G11600.1	Thale cress	plastid	46.34	32.48
Bra028737.1-P	Field mustard	plastid	47.56	32.23
CDX80998	Canola	plastid	47.56	32.23
PGSC0003DMT400072576	Potato	plastid	41.46	32.08
CDX73863	Canola	plastid	46.34	31.93
Bra001413.1-P	Field mustard	plastid	46.34	31.93
Bra038666.1-P	Field mustard	plastid	45.12	31.9
GSMUA_Achr10P...	Banana	cytosol	45.12	31.36
GSMUA_Achr6P19430_001	Banana	nucleus	43.9	31.03
TraesCS3D01G368200.1	Wheat	plastid	47.56	30.95
CDY64732	Canola	plastid	46.34	30.89
Bra009178.1-P	Field mustard	plastid	46.34	30.89
CDY08510	Canola	nucleus, plastid	43.9	30.51
CDY01039	Canola	mitochondrion, nucleus	43.9	30.51
Bra034826.1-P	Field mustard	plastid	43.9	30.51
CDY14087	Canola	plastid	50.0	30.37
KRH22650	Soybean	cytosol, plastid	39.02	29.91
KRH25293	Soybean	plastid	39.02	29.36
CDY04984	Canola	plastid	47.56	28.89
TraesCS2D01G294500.1	Wheat	cytosol	40.24	28.7
Solyc06g073990.1.1	Tomato	nucleus, plastid	41.46	28.57
KRH26665	Soybean	plastid	34.15	27.18
PGSC0003DMT400050486	Potato	cytosol, plastid	37.8	26.27
PGSC0003DMT400015190	Potato	nucleus, plastid	39.02	26.02
KRH26666	Soybean	cytosol	35.37	25.66
Solyc01g007870.2.1	Tomato	nucleus	39.02	25.4
PGSC0003DMT400042213	Potato	cytosol	40.24	25.0
KRH26667	Soybean	nucleus, plastid	34.15	25.0
KRH22648	Soybean	nucleus, plastid	36.59	24.79
TraesCS1D01G275300.1	Wheat	nucleus	39.02	24.06
VIT_08s0007g02600.t01	Wine grape	plastid	47.56	17.89

Protein Annotations

EnsemblPlants:TraesCS2D01G379500.1

EnsemblPlantsGene:TraesCS2D01G379500

PANTHER:PTHR33177

PANTHER:PTHR33177:SF20

MapMan:35.2

Description

No Description!

Coordinates

chr2D:+:484071974..484072832

Molecular Weight (calculated)

8611.3 Da

IEP (calculated)

5.602

GRAVY (calculated)

-0.066

Length

82 amino acids

Sequence
(BLAST)

1: MASTVESPTS SCVSSDTEEE AAAVTKPMVV VGCPQCLMYV MLSGAAEEQP RCPRCKSPVL LHFLHGAVAD AASTNRQQPS KS

Best Arabidopsis Sequence Match ( AT3G11600.1 )
(BLAST)

001: MSRRNKNGPK LELRLNLSPP PSQASQMSLV RSPNRSNTTS PSSCVSSETN QEENETITSM VLVGCPRCLM YVMLSDDDPK CPKCKSTVLL DFLQENAFAA
101: TTATAANTRR KKKTWWN

Arabidopsis Description

E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:Q9SRN4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.