CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009178.1-P	Field mustard	plastid	100.0	100.0
AT5G06270.1	Thale cress	mitochondrion, plastid	89.43	90.16
CDY47258	Canola	plastid	85.37	86.78
CDX80998	Canola	plastid	82.11	83.47
CDY04984	Canola	plastid	85.37	77.78
CDY14087	Canola	plastid	83.74	76.3
KRH67976	Soybean	nucleus, plastid	65.04	73.39
KRG96232	Soybean	nucleus, plastid	65.04	73.39
GSMUA_Achr8P07800_001	Banana	cytosol, extracellular	26.02	64.0
CDY08510	Canola	nucleus, plastid	58.54	61.02
CDX73863	Canola	plastid	58.54	60.5
CDY01039	Canola	mitochondrion, nucleus	57.72	60.17
GSMUA_Achr10P...	Banana	cytosol	49.59	51.69
GSMUA_Achr8P16130_001	Banana	cytosol	43.09	51.46
GSMUA_Achr11P...	Banana	nucleus	43.9	50.47
Solyc06g073990.1.1	Tomato	nucleus, plastid	47.97	49.58
TraesCS4B01G346800.1	Wheat	plastid	46.34	49.57
TraesCS2A01G296600.1	Wheat	cytosol	46.34	49.57
TraesCS2B01G312800.1	Wheat	cytosol	46.34	49.57
TraesCS2D01G294500.1	Wheat	cytosol	46.34	49.57
Zm00001d025361_P001	Maize	nucleus	44.72	49.55
Os04t0415000-01	Rice	cytosol	46.34	49.14
GSMUA_Achr6P07030_001	Banana	cytosol, plastid	48.78	48.0
PGSC0003DMT400015190	Potato	nucleus, plastid	47.97	47.97
EES10769	Sorghum	mitochondrion	44.72	47.83
TraesCS7D01G324300.1	Wheat	cytosol	25.2	47.69
GSMUA_Achr6P19430_001	Banana	nucleus	44.72	47.41
TraesCS2B01G400400.1	Wheat	cytosol	31.71	46.99
TraesCS2D01G379500.1	Wheat	cytosol	30.89	46.34
TraesCS2D01G597400.1	Wheat	cytosol, plastid	31.71	45.88
TraesCS2A01G383200.1	Wheat	cytosol	30.08	45.12
PGSC0003DMT400050486	Potato	cytosol, plastid	43.09	44.92
Os04t0684600-01	Rice	cytosol	29.27	44.44
Zm00001d001776_P001	Maize	cytosol, plastid	28.46	43.75
HORVU2Hr1G089140.1	Barley	cytosol	29.27	43.37
Os08t0102250-00	Rice	cytosol	23.58	42.65
Os02t0536500-01	Rice	mitochondrion	42.28	42.28
TraesCS3D01G368200.1	Wheat	plastid	43.09	42.06
Zm00001d038287_P001	Maize	mitochondrion	44.72	41.98
TraesCS3B01G407900.1	Wheat	plastid	43.09	41.73
GSMUA_Achr9P02640_001	Banana	cytosol	39.84	41.53
HORVU3Hr1G083720.1	Barley	plastid	42.28	41.27
Zm00001d003763_P001	Maize	cytosol	43.9	41.22
Os01t0863500-01	Rice	plastid	43.09	41.09
TraesCS3A01G375700.1	Wheat	plastid	42.28	40.94
Zm00001d042754_P001	Maize	mitochondrion, plastid	40.65	40.65
EES11682	Sorghum	cytosol, plastid	30.89	40.43
TraesCS1A01G275700.1	Wheat	plastid	43.9	40.3
TraesCS1D01G275300.1	Wheat	nucleus	43.09	39.85
Os05t0442000-00	Rice	cytosol, mitochondrion, nucleus, plastid	41.46	38.64
VIT_08s0007g02600.t01	Wine grape	plastid	68.29	38.53
EES05192	Sorghum	nucleus, plastid	44.72	38.19
Zm00001d016743_P001	Maize	nucleus	46.34	38.0
HORVU2Hr1G073380.7	Barley	cytosol, mitochondrion, nucleus, plastid	43.09	37.59
OQU87905	Sorghum	mitochondrion, plastid	34.96	36.44
HORVU1Hr1G074000.6	Barley	mitochondrion	41.46	31.48
EES19598	Sorghum	cytosol, plastid	43.09	28.96
TraesCS1B01G284900.1	Wheat	extracellular, plastid, vacuole	43.09	28.96
GSMUA_Achr6P12990_001	Banana	nucleus	37.4	22.55

Protein Annotations

EnsemblPlants:CDY64732	EnsemblPlantsGene:GSBRNA2T00042628001	PANTHER:PTHR33177	PANTHER:PTHR33177:SF8	ProteinID:CDY64732	ProteinID:CDY64732.1
SEG:seg	UniParc:UPI0002544FE5	UniProt:A0A078JH43	MapMan:35.2	:	:

Description

BnaA10g30640DBnaA10g30640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JH43]

Coordinates

chrLK034533:+:26614..27561

Molecular Weight (calculated)

13413.8 Da

IEP (calculated)

10.182

GRAVY (calculated)

-0.794

Length

123 amino acids

Sequence
(BLAST)

001: MSRRSPKVDL KLNLSPPTSS RRRMVRSPSR SATTSPTSPP SSCVSSEMNQ DESSVRYSSS PETTSMVLVG CPRCLMYVML SEDDPKCPKC QSTVLLDFNH
101: ENASNANART PGAGSSGRKT RRN

Best Arabidopsis Sequence Match ( AT5G06270.2 )
(BLAST)

001: MSRRSPKLEL KLNLSPPTSS QRRMVRSPSR SATTSPTSPP SSCVSSEMNQ DEPSVRYSTS PETTSMVLVG CPRCLMYVML SEDDPKCPKC KSTVLLDFLH
101: ENATNANANA AAASSGRKTR RN

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FNI1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.