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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
  • cytosol 1
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr11P... Banana nucleus 25.49 48.6
EES10769 Sorghum mitochondrion 25.98 46.09
Zm00001d025361_P001 Maize nucleus 25.0 45.95
GSMUA_Achr8P16130_001 Banana cytosol 23.04 45.63
TraesCS2D01G294500.1 Wheat cytosol 25.0 44.35
Os04t0415000-01 Rice cytosol 25.0 43.97
TraesCS2B01G312800.1 Wheat cytosol 24.51 43.48
TraesCS2A01G296600.1 Wheat cytosol 24.51 43.48
TraesCS4B01G346800.1 Wheat plastid 24.02 42.61
KRH67976 Soybean nucleus, plastid 22.55 42.2
GSMUA_Achr8P07800_001 Banana cytosol, extracellular 10.29 42.0
KRG96232 Soybean nucleus, plastid 22.06 41.28
Zm00001d003763_P001 Maize cytosol 25.98 40.46
HORVU2Hr1G073380.7 Barley cytosol, mitochondrion, nucleus, plastid 27.45 39.72
GSMUA_Achr6P19430_001 Banana nucleus 22.06 38.79
GSMUA_Achr6P07030_001 Banana cytosol, plastid 23.53 38.4
GSMUA_Achr10P... Banana cytosol 22.06 38.14
Bra028737.1-P Field mustard plastid 22.55 38.02
CDY64732 Canola plastid 22.55 37.4
Bra009178.1-P Field mustard plastid 22.55 37.4
AT5G06270.1 Thale cress mitochondrion, plastid 22.06 36.89
Os02t0536500-01 Rice mitochondrion 22.06 36.59
EES05192 Sorghum nucleus, plastid 25.49 36.11
CDY14087 Canola plastid 23.53 35.56
Bra005888.1-P Field mustard plastid 21.08 35.54
CDY47258 Canola plastid 20.59 34.71
CDX80998 Canola plastid 20.59 34.71
Bra038666.1-P Field mustard plastid 19.61 34.48
GSMUA_Achr9P02640_001 Banana cytosol 19.61 33.9
Solyc10g083140.1.1 Tomato plastid 11.27 33.82
KRH30377 Soybean plastid 18.14 33.64
AT3G11600.1 Thale cress plastid 19.12 33.33
Zm00001d016743_P001 Maize nucleus 24.51 33.33
CDY04984 Canola plastid 22.06 33.33
KRH25293 Soybean plastid 17.65 33.03
Solyc06g073990.1.1 Tomato nucleus, plastid 18.63 31.93
KRH26667 Soybean nucleus, plastid 16.67 30.36
PGSC0003DMT400042213 Potato cytosol 19.61 30.3
CDX73863 Canola plastid 17.65 30.25
Bra001413.1-P Field mustard plastid 17.65 30.25
PGSC0003DMT400072576 Potato plastid 15.69 30.19
Solyc01g007870.2.1 Tomato nucleus 18.63 30.16
PGSC0003DMT400015190 Potato nucleus, plastid 18.14 30.08
KRH22649 Soybean cytosol 9.8 29.85
Bra034826.1-P Field mustard plastid 17.16 29.66
CDY01039 Canola mitochondrion, nucleus 17.16 29.66
CDY08510 Canola nucleus, plastid 17.16 29.66
KRH26666 Soybean cytosol 16.18 29.2
KRH22650 Soybean cytosol, plastid 14.71 28.04
PGSC0003DMT400050486 Potato cytosol, plastid 16.18 27.97
KRH26665 Soybean plastid 13.73 27.18
KRH22648 Soybean nucleus, plastid 15.2 25.62
VIT_08s0007g02600.t01 Wine grape plastid 25.98 24.31
Protein Annotations
EnsemblPlants:GSMUA_Achr6P12990_001EnsemblPlants:GSMUA_Achr6T12990_001EnsemblPlantsGene:GSMUA_Achr6G12990_001PANTHER:PTHR33177PANTHER:PTHR33177:SF3SEG:seg
UniParc:UPI000296D91AUniProt:M0T6J7MapMan:35.2:::
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G12990_001]
Coordinates
chr6:+:8709531..8712422
Molecular Weight (calculated)
22579.2 Da
IEP (calculated)
9.273
GRAVY (calculated)
-0.604
Length
204 amino acids
Sequence
(BLAST)
001: MASEAHLPHH NTGKRRARVV VEIPPLTLLP RRSTRRQSLL LKRTRMSRRS NHGKSHKVDL KLNLAPPMRE DASRRAATVV DSPRGSSSSS SCLSSETEQG
101: LPCQTSPEAT SMVLAACPRC LMYVMLPEED PKCCPKMKEF IESGGPSQSL KMSRPSSSCE LHGQNLPNSF EFILHTKASA GNLERESHLI TSDLTKCNEE
201: CTIK
Best Arabidopsis Sequence Match ( AT3G11600.1 )
(BLAST)
001: MSRRNKNGPK LELRLNLSPP PSQASQMSLV RSPNRSNTTS PSSCVSSETN QEENETITSM VLVGCPRCLM YVMLSDDDPK CPKCKSTVLL DFLQENAFAA
101: TTATAANTRR KKKTWWN
Arabidopsis Description
E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:Q9SRN4]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.