CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4
plasma membrane 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30377	Soybean	plastid	77.06	76.36
GSMUA_Achr8P07800_001	Banana	cytosol, extracellular	27.52	60.0
KRH22650	Soybean	cytosol, plastid	53.21	54.21
GSMUA_Achr11P...	Banana	nucleus	50.46	51.4
KRG96232	Soybean	nucleus, plastid	48.62	48.62
KRH67976	Soybean	nucleus, plastid	48.62	48.62
KRH26665	Soybean	plastid	44.04	46.6
KRH22649	Soybean	cytosol	28.44	46.27
GSMUA_Achr8P16130_001	Banana	cytosol	43.12	45.63
Os08t0102250-00	Rice	cytosol	28.44	45.59
TraesCS7D01G324300.1	Wheat	cytosol	26.61	44.62
Zm00001d001776_P001	Maize	cytosol, plastid	32.11	43.75
GSMUA_Achr10P...	Banana	cytosol	46.79	43.22
Os04t0684600-01	Rice	cytosol	32.11	43.21
KRH22648	Soybean	nucleus, plastid	47.71	42.98
KRH26667	Soybean	nucleus, plastid	43.12	41.96
KRH26666	Soybean	cytosol	43.12	41.59
TraesCS4B01G346800.1	Wheat	plastid	43.12	40.87
TraesCS2D01G294500.1	Wheat	cytosol	43.12	40.87
TraesCS2A01G296600.1	Wheat	cytosol	43.12	40.87
TraesCS2B01G312800.1	Wheat	cytosol	43.12	40.87
Zm00001d025361_P001	Maize	nucleus	41.28	40.54
EES11682	Sorghum	cytosol, plastid	33.95	39.36
EES10769	Sorghum	mitochondrion	41.28	39.13
TraesCS2A01G383200.1	Wheat	cytosol	29.36	39.02
TraesCS2D01G379500.1	Wheat	cytosol	29.36	39.02
TraesCS2D01G597400.1	Wheat	cytosol, plastid	30.28	38.82
TraesCS2B01G400400.1	Wheat	cytosol	29.36	38.55
HORVU2Hr1G089140.1	Barley	cytosol	29.36	38.55
GSMUA_Achr6P07030_001	Banana	cytosol, plastid	44.04	38.4
GSMUA_Achr6P19430_001	Banana	nucleus	40.37	37.93
Os04t0415000-01	Rice	cytosol	39.45	37.07
TraesCS1A01G275700.1	Wheat	plastid	44.95	36.57
TraesCS1D01G275300.1	Wheat	nucleus	44.04	36.09
Zm00001d038287_P001	Maize	mitochondrion	43.12	35.88
Zm00001d003763_P001	Maize	cytosol	43.12	35.88
GSMUA_Achr9P02640_001	Banana	cytosol	38.53	35.59
Os05t0442000-00	Rice	cytosol, mitochondrion, nucleus, plastid	42.2	34.85
TraesCS3A01G375700.1	Wheat	plastid	40.37	34.65
Zm00001d042754_P001	Maize	mitochondrion, plastid	38.53	34.15
Os01t0863500-01	Rice	plastid	40.37	34.11
Os02t0536500-01	Rice	mitochondrion	37.61	33.33
TraesCS3D01G368200.1	Wheat	plastid	38.53	33.33
HORVU3Hr1G083720.1	Barley	plastid	38.53	33.33
TraesCS3B01G407900.1	Wheat	plastid	38.53	33.07
EES05192	Sorghum	nucleus, plastid	43.12	32.64
Zm00001d016743_P001	Maize	nucleus	43.12	31.33
HORVU2Hr1G073380.7	Barley	cytosol, mitochondrion, nucleus, plastid	39.45	30.5
HORVU1Hr1G074000.6	Barley	mitochondrion	44.04	29.63
OQU87905	Sorghum	mitochondrion, plastid	30.28	27.97
TraesCS1B01G284900.1	Wheat	extracellular, plastid, vacuole	44.04	26.23
EES19598	Sorghum	cytosol, plastid	43.12	25.68
GSMUA_Achr6P12990_001	Banana	nucleus	33.03	17.65

Protein Annotations

EMBL:ACUP02007229	EnsemblPlants:KRH25293	EnsemblPlantsGene:GLYMA_12G093000	EntrezGene:102667525	PANTHER:PTHR33177	PANTHER:PTHR33177:SF11
ProteinID:KRH25293	ProteinID:KRH25293.1	SEG:seg	UniParc:UPI00023D13BE	UniProt:I1LRJ7	MapMan:35.2

Description

hypothetical protein

Coordinates

chr12:+:7611927..7612765

Molecular Weight (calculated)

11840.1 Da

IEP (calculated)

6.467

GRAVY (calculated)

-0.272

Length

109 amino acids

Sequence
(BLAST)

001: MSKRARSPRL ELRLNLSPPR AAATSIISSS ELSSTESSTL SPVSVQSLES SCVSSEAEET RAMLLVGCPR CLLYVMLSEV DPKCPKCKST VLLDFLNNEE
101: NNTKKSSSE

Best Arabidopsis Sequence Match ( AT5G22270.1 )
(BLAST)

1: MNQEAASNLG LDLKLNISPS LDSSLLTESS SSSLCSEEAE GGGGEAKSMV VVGCPNCIMY IITSLENDPR CPRCNSHVLL DFLTGNHSKK STS

Arabidopsis Description

AT5G22270 protein [Source:UniProtKB/TrEMBL;Acc:Q9FMS4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.