CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025361_P001	Maize	nucleus	86.09	89.19
Os04t0415000-01	Rice	cytosol	85.22	84.48
TraesCS2D01G294500.1	Wheat	cytosol	84.35	84.35
TraesCS2A01G296600.1	Wheat	cytosol	83.48	83.48
TraesCS4B01G346800.1	Wheat	plastid	82.61	82.61
TraesCS2B01G312800.1	Wheat	cytosol	82.61	82.61
Zm00001d003763_P001	Maize	cytosol	86.09	75.57
HORVU2Hr1G073380.7	Barley	cytosol, mitochondrion, nucleus, plastid	75.65	61.7
GSMUA_Achr11P...	Banana	nucleus	52.17	56.07
GSMUA_Achr8P16130_001	Banana	cytosol	48.7	54.37
KRG96232	Soybean	nucleus, plastid	50.43	53.21
KRH67976	Soybean	nucleus, plastid	50.43	53.21
EES05192	Sorghum	nucleus, plastid	59.13	47.22
AT5G06270.1	Thale cress	mitochondrion, plastid	49.57	46.72
Bra028737.1-P	Field mustard	plastid	47.83	45.45
CDY64732	Canola	plastid	47.83	44.72
Bra009178.1-P	Field mustard	plastid	47.83	44.72
CDY47258	Canola	plastid	46.96	44.63
Solyc10g083140.1.1	Tomato	plastid	26.09	44.12
CDX80998	Canola	plastid	46.09	43.8
Bra038666.1-P	Field mustard	plastid	43.48	43.1
Bra005888.1-P	Field mustard	plastid	45.22	42.98
AT3G11600.1	Thale cress	plastid	43.48	42.73
CDY14087	Canola	plastid	49.57	42.22
KRH25293	Soybean	plastid	39.13	41.28
KRH30377	Soybean	plastid	39.13	40.91
CDY04984	Canola	plastid	47.83	40.74
GSMUA_Achr9P02640_001	Banana	cytosol	41.74	40.68
Bra001413.1-P	Field mustard	plastid	41.74	40.34
CDX73863	Canola	plastid	41.74	40.34
KRH22650	Soybean	cytosol, plastid	37.39	40.19
PGSC0003DMT400072576	Potato	plastid	36.52	39.62
CDY08510	Canola	nucleus, plastid	40.0	38.98
Bra034826.1-P	Field mustard	plastid	40.0	38.98
KRH22649	Soybean	cytosol	22.61	38.81
GSMUA_Achr6P07030_001	Banana	cytosol, plastid	41.74	38.4
EES11682	Sorghum	cytosol, plastid	31.3	38.3
CDY01039	Canola	mitochondrion, nucleus	39.13	38.14
Solyc01g007870.2.1	Tomato	nucleus	41.74	38.1
KRH26665	Soybean	plastid	33.91	37.86
PGSC0003DMT400042213	Potato	cytosol	42.61	37.12
Solyc06g073990.1.1	Tomato	nucleus, plastid	37.39	36.13
PGSC0003DMT400015190	Potato	nucleus, plastid	38.26	35.77
OQU87905	Sorghum	mitochondrion, plastid	35.65	34.75
PGSC0003DMT400050486	Potato	cytosol, plastid	33.04	32.2
KRH26666	Soybean	cytosol	31.3	31.86
KRH26667	Soybean	nucleus, plastid	29.57	30.36
KRH22648	Soybean	nucleus, plastid	29.57	28.1
EES19598	Sorghum	cytosol, plastid	41.74	26.23
VIT_08s0007g02600.t01	Wine grape	plastid	49.57	26.15
GSMUA_Achr6P12990_001	Banana	nucleus	46.09	25.98

Protein Annotations

EnsemblPlants:EES10769	EnsemblPlantsGene:SORBI_3006G073700	EntrezGene:8072996	PANTHER:PTHR33177	PANTHER:PTHR33177:SF3	ProteinID:EES10769
ProteinID:EES10769.1	RefSeq:XP_002446441.1	SEG:seg	UniParc:UPI0001A86F45	UniProt:C5YG92	MapMan:35.2

Description

hypothetical protein

Coordinates

chr6:+:43615597..43617633

Molecular Weight (calculated)

12636.7 Da

IEP (calculated)

8.792

GRAVY (calculated)

-0.843

Length

115 amino acids

Sequence
(BLAST)

001: MSRSNRKSSR GLDLKLNLSL PATGGSSRRA MADEESSPSS CLSSENEHGL QWSNSPEATS MVLAACPRCF IYVMLPQDDP RCPQCKSPVL LDFLQDNNSN
101: SKNNSNNSSR RSRRG

Best Arabidopsis Sequence Match ( AT5G06270.2 )
(BLAST)

001: MSRRSPKLEL KLNLSPPTSS QRRMVRSPSR SATTSPTSPP SSCVSSEMNQ DEPSVRYSTS PETTSMVLVG CPRCLMYVML SEDDPKCPKC KSTVLLDFLH
101: ENATNANANA AAASSGRKTR RN

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FNI1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.