Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d025361_P001 | Maize | nucleus | 81.9 | 85.59 |
| EES10769 | Sorghum | mitochondrion | 84.48 | 85.22 |
| TraesCS2D01G294500.1 | Wheat | cytosol | 82.76 | 83.48 |
| TraesCS2B01G312800.1 | Wheat | cytosol | 81.9 | 82.61 |
| TraesCS2A01G296600.1 | Wheat | cytosol | 81.9 | 82.61 |
| TraesCS4B01G346800.1 | Wheat | plastid | 81.03 | 81.74 |
| Zm00001d003763_P001 | Maize | cytosol | 79.31 | 70.23 |
| HORVU2Hr1G073380.7 | Barley | cytosol, mitochondrion, nucleus, plastid | 76.72 | 63.12 |
| GSMUA_Achr11P... | Banana | nucleus | 51.72 | 56.07 |
| Os02t0536500-01 | Rice | mitochondrion | 57.76 | 54.47 |
| GSMUA_Achr8P16130_001 | Banana | cytosol | 48.28 | 54.37 |
| KRH67976 | Soybean | nucleus, plastid | 50.0 | 53.21 |
| KRG96232 | Soybean | nucleus, plastid | 49.14 | 52.29 |
| AT5G06270.1 | Thale cress | mitochondrion, plastid | 51.72 | 49.18 |
| CDY47258 | Canola | plastid | 50.0 | 47.93 |
| Bra005888.1-P | Field mustard | plastid | 49.14 | 47.11 |
| Bra028737.1-P | Field mustard | plastid | 49.14 | 47.11 |
| CDX80998 | Canola | plastid | 49.14 | 47.11 |
| CDY64732 | Canola | plastid | 49.14 | 46.34 |
| Bra009178.1-P | Field mustard | plastid | 49.14 | 46.34 |
| CDY14087 | Canola | plastid | 51.72 | 44.44 |
| Solyc10g083140.1.1 | Tomato | plastid | 25.86 | 44.12 |
| Bra038666.1-P | Field mustard | plastid | 43.1 | 43.1 |
| Os08t0102250-00 | Rice | cytosol | 25.0 | 42.65 |
| CDY04984 | Canola | plastid | 49.14 | 42.22 |
| AT3G11600.1 | Thale cress | plastid | 42.24 | 41.88 |
| GSMUA_Achr9P02640_001 | Banana | cytosol | 42.24 | 41.53 |
| Bra001413.1-P | Field mustard | plastid | 41.38 | 40.34 |
| CDX73863 | Canola | plastid | 41.38 | 40.34 |
| Os04t0684600-01 | Rice | cytosol | 27.59 | 39.51 |
| KRH25293 | Soybean | plastid | 37.07 | 39.45 |
| GSMUA_Achr6P07030_001 | Banana | cytosol, plastid | 42.24 | 39.2 |
| KRH30377 | Soybean | plastid | 37.07 | 39.09 |
| CDY08510 | Canola | nucleus, plastid | 39.66 | 38.98 |
| Bra034826.1-P | Field mustard | plastid | 39.66 | 38.98 |
| PGSC0003DMT400072576 | Potato | plastid | 35.34 | 38.68 |
| CDY01039 | Canola | mitochondrion, nucleus | 38.79 | 38.14 |
| KRH22649 | Soybean | cytosol | 21.55 | 37.31 |
| KRH22650 | Soybean | cytosol, plastid | 33.62 | 36.45 |
| PGSC0003DMT400015190 | Potato | nucleus, plastid | 37.93 | 35.77 |
| Solyc01g007870.2.1 | Tomato | nucleus | 38.79 | 35.71 |
| Solyc06g073990.1.1 | Tomato | nucleus, plastid | 36.21 | 35.29 |
| KRH26665 | Soybean | plastid | 31.03 | 34.95 |
| PGSC0003DMT400042213 | Potato | cytosol | 39.66 | 34.85 |
| Os01t0863500-01 | Rice | plastid | 37.93 | 34.11 |
| KRH26666 | Soybean | cytosol | 31.9 | 32.74 |
| Os05t0442000-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 36.21 | 31.82 |
| KRH26667 | Soybean | nucleus, plastid | 30.17 | 31.25 |
| PGSC0003DMT400050486 | Potato | cytosol, plastid | 30.17 | 29.66 |
| KRH22648 | Soybean | nucleus, plastid | 30.17 | 28.93 |
| VIT_08s0007g02600.t01 | Wine grape | plastid | 49.14 | 26.15 |
| GSMUA_Achr6P12990_001 | Banana | nucleus | 43.97 | 25.0 |
Protein Annotations
| EMBL:AK108662 | EnsemblPlants:Os04t0415000-01 | EnsemblPlantsGene:Os04g0415000 | EntrezGene:4335802 | PANTHER:PTHR33177 | PANTHER:PTHR33177:SF3 |
| ProteinID:BAF14671.1 | ProteinID:BAS89149.1 | ProteinID:CAE01516.1 | ProteinID:EAZ30693.1 | RefSeq:XP_015637030.1 | SEG:seg |
| UniParc:UPI00001B0BF3 | UniProt:Q7XTG2 | MapMan:35.2 | : | : | : |
Description
Similar to H0622F05.5 protein. (Os04t0415000-01)
Coordinates
chr4:+:20508625..20509566
Molecular Weight (calculated)
12705.8 Da
IEP (calculated)
8.505
GRAVY (calculated)
-0.803
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRSNKKSSR GIDLKLNLSL PARGDSSSRR AMAADEESSP SSCLSSENEH GLQWSNSPEA TSMVLAACPR CFIYVMLPQD DPRCPQCKSP VILDFLQQDN
101: GNNNANSNSS RKTRRG
101: GNNNANSNSS RKTRRG
001: MSRRSPKLEL KLNLSPPTSS QRRMVRSPSR SATTSPTSPP SSCVSSEMNQ DEPSVRYSTS PETTSMVLVG CPRCLMYVML SEDDPKCPKC KSTVLLDFLH
101: ENATNANANA AAASSGRKTR RN
101: ENATNANANA AAASSGRKTR RN
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9FNI1]
SUBAcon: [plastid,mitochondrion]
SUBAcon: [plastid,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.