Factsheet for Os05t0442000-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
plasma membrane 1
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038287_P001	Maize	mitochondrion	65.91	66.41
GSMUA_Achr8P07800_001	Banana	cytosol, extracellular	23.48	62.0
Os01t0863500-01	Rice	plastid	56.06	57.36
Os04t0684600-01	Rice	cytosol	30.3	49.38
KRH67976	Soybean	nucleus, plastid	40.15	48.62
KRG96232	Soybean	nucleus, plastid	40.15	48.62
EES19598	Sorghum	cytosol, plastid	66.67	48.09
Solyc10g083140.1.1	Tomato	plastid	24.24	47.06
KRH30377	Soybean	plastid	38.64	46.36
Bra038666.1-P	Field mustard	plastid	39.39	44.83
AT3G11600.1	Thale cress	plastid	39.39	44.44
Bra034826.1-P	Field mustard	plastid	39.39	44.07
CDY08510	Canola	nucleus, plastid	39.39	44.07
KRH22649	Soybean	cytosol	21.97	43.28
CDY01039	Canola	mitochondrion, nucleus	38.64	43.22
GSMUA_Achr6P19430_001	Banana	nucleus	37.88	43.1
AT5G06270.1	Thale cress	mitochondrion, plastid	39.39	42.62
PGSC0003DMT400072576	Potato	plastid	34.09	42.45
GSMUA_Achr10P...	Banana	cytosol	37.88	42.37
KRH25293	Soybean	plastid	34.85	42.2
Bra028737.1-P	Field mustard	plastid	38.64	42.15
CDX80998	Canola	plastid	38.64	42.15
Bra001413.1-P	Field mustard	plastid	37.88	42.02
CDX73863	Canola	plastid	37.88	42.02
CDY64732	Canola	plastid	38.64	41.46
Bra009178.1-P	Field mustard	plastid	38.64	41.46
CDY47258	Canola	plastid	37.88	41.32
Os08t0102250-00	Rice	cytosol	21.21	41.18
PGSC0003DMT400050486	Potato	cytosol, plastid	36.36	40.68
Bra005888.1-P	Field mustard	plastid	37.12	40.5
KRH22650	Soybean	cytosol, plastid	32.58	40.19
Solyc06g073990.1.1	Tomato	nucleus, plastid	35.61	39.5
Solyc01g007870.2.1	Tomato	nucleus	37.12	38.89
CDY14087	Canola	plastid	38.64	37.78
CDY04984	Canola	plastid	37.88	37.04
PGSC0003DMT400015190	Potato	nucleus, plastid	34.09	36.59
KRH22648	Soybean	nucleus, plastid	33.33	36.36
Os04t0415000-01	Rice	cytosol	31.82	36.21
Os02t0536500-01	Rice	mitochondrion	33.33	35.77
PGSC0003DMT400042213	Potato	cytosol	35.61	35.61
KRH26667	Soybean	nucleus, plastid	28.79	33.93
KRH26666	Soybean	cytosol	28.03	32.74
KRH26665	Soybean	plastid	23.48	30.1
VIT_08s0007g02600.t01	Wine grape	plastid	37.88	22.94

Protein Annotations

EnsemblPlants:Os05t0442000-00	EnsemblPlantsGene:Os05g0442000	EntrezGene:9272510	PANTHER:PTHR33177	PANTHER:PTHR33177:SF10	ProteinID:BAH93179.1
ProteinID:BAS94251.1	RefSeq:XP_015638623.1	SEG:seg	UniParc:UPI0001B6630E	UniProt:C7J270	MapMan:35.2

Description

Hypothetical conserved gene. (Os05t0442000-00)

Coordinates

chr5:-:21640740..21641648

Molecular Weight (calculated)

13028.3 Da

IEP (calculated)

10.480

GRAVY (calculated)

-0.546

Length

132 amino acids

Sequence
(BLAST)

001: MSRNNGGKGG KLQEARVNLP STRGRGGTSS GVVGGSSSPR RLSSSSSSTA SPPSSCVSSE GSPEAGGGGG GGGSSGMILA GCPRCMMYVM LSREDPKCPK
101: CHSTVLLDFN DAAAAADPRQ VGAGKSKGKH RG

Best Arabidopsis Sequence Match ( AT3G11600.1 )
(BLAST)

001: MSRRNKNGPK LELRLNLSPP PSQASQMSLV RSPNRSNTTS PSSCVSSETN QEENETITSM VLVGCPRCLM YVMLSDDDPK CPKCKSTVLL DFLQENAFAA
101: TTATAANTRR KKKTWWN

Arabidopsis Description

E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:Q9SRN4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.