Factsheet for GSMUA_Achr6P19430_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plasma membrane 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P07800_001	Banana	cytosol, extracellular	30.17	70.0
GSMUA_Achr10P...	Banana	cytosol	58.62	57.63
Os08t0102250-00	Rice	cytosol	31.03	52.94
TraesCS7D01G324300.1	Wheat	cytosol	29.31	52.31
KRH67976	Soybean	nucleus, plastid	49.14	52.29
KRG96232	Soybean	nucleus, plastid	49.14	52.29
GSMUA_Achr11P...	Banana	nucleus	46.55	50.47
Solyc10g083140.1.1	Tomato	plastid	28.45	48.53
AT5G06270.1	Thale cress	mitochondrion, plastid	48.28	45.9
Os04t0684600-01	Rice	cytosol	31.9	45.68
GSMUA_Achr8P16130_001	Banana	cytosol	40.52	45.63
Bra028737.1-P	Field mustard	plastid	47.41	45.45
CDY64732	Canola	plastid	47.41	44.72
Bra009178.1-P	Field mustard	plastid	47.41	44.72
TraesCS2D01G597400.1	Wheat	cytosol, plastid	32.76	44.71
CDY47258	Canola	plastid	46.55	44.63
TraesCS2D01G379500.1	Wheat	cytosol	31.03	43.9
TraesCS2A01G383200.1	Wheat	cytosol	31.03	43.9
CDX80998	Canola	plastid	45.69	43.8
Zm00001d001776_P001	Maize	cytosol, plastid	30.17	43.75
Solyc06g073990.1.1	Tomato	nucleus, plastid	44.83	43.7
EES11682	Sorghum	cytosol, plastid	35.34	43.62
HORVU2Hr1G089140.1	Barley	cytosol	31.03	43.37
TraesCS2B01G400400.1	Wheat	cytosol	31.03	43.37
KRH22649	Soybean	cytosol	25.0	43.28
PGSC0003DMT400015190	Potato	nucleus, plastid	45.69	43.09
Bra005888.1-P	Field mustard	plastid	44.83	42.98
AT3G11600.1	Thale cress	plastid	43.1	42.73
Bra038666.1-P	Field mustard	plastid	42.24	42.24
KRH22650	Soybean	cytosol, plastid	37.93	41.12
CDY14087	Canola	plastid	47.41	40.74
TraesCS1D01G275300.1	Wheat	nucleus	46.55	40.6
KRH25293	Soybean	plastid	37.93	40.37
TraesCS1A01G275700.1	Wheat	plastid	46.55	40.3
KRH30377	Soybean	plastid	37.93	40.0
CDY04984	Canola	plastid	45.69	39.26
GSMUA_Achr6P07030_001	Banana	cytosol, plastid	42.24	39.2
Bra034826.1-P	Field mustard	plastid	39.66	38.98
CDY08510	Canola	nucleus, plastid	39.66	38.98
Bra001413.1-P	Field mustard	plastid	39.66	38.66
CDX73863	Canola	plastid	39.66	38.66
CDY01039	Canola	mitochondrion, nucleus	38.79	38.14
GSMUA_Achr9P02640_001	Banana	cytosol	38.79	38.14
TraesCS3D01G368200.1	Wheat	plastid	41.38	38.1
HORVU3Hr1G083720.1	Barley	plastid	41.38	38.1
Os05t0442000-00	Rice	cytosol, mitochondrion, nucleus, plastid	43.1	37.88
TraesCS3B01G407900.1	Wheat	plastid	41.38	37.8
PGSC0003DMT400072576	Potato	plastid	34.48	37.74
Zm00001d042754_P001	Maize	mitochondrion, plastid	39.66	37.4
Os01t0863500-01	Rice	plastid	41.38	37.21
TraesCS3A01G375700.1	Wheat	plastid	40.52	37.01
Zm00001d038287_P001	Maize	mitochondrion	41.38	36.64
KRH26665	Soybean	plastid	31.9	35.92
Solyc01g007870.2.1	Tomato	nucleus	37.93	34.92
KRH26667	Soybean	nucleus, plastid	33.62	34.82
OQU87905	Sorghum	mitochondrion, plastid	35.34	34.75
PGSC0003DMT400042213	Potato	cytosol	38.79	34.09
PGSC0003DMT400050486	Potato	cytosol, plastid	34.48	33.9
KRH26666	Soybean	cytosol	31.03	31.86
HORVU1Hr1G074000.6	Barley	mitochondrion	43.97	31.48
TraesCS1B01G284900.1	Wheat	extracellular, plastid, vacuole	46.55	29.51
KRH22648	Soybean	nucleus, plastid	30.17	28.93
EES19598	Sorghum	cytosol, plastid	40.52	25.68
VIT_08s0007g02600.t01	Wine grape	plastid	45.69	24.31
GSMUA_Achr6P12990_001	Banana	nucleus	38.79	22.06

Protein Annotations

EnsemblPlants:GSMUA_Achr6P19430_001	EnsemblPlants:GSMUA_Achr6T19430_001	EnsemblPlantsGene:GSMUA_Achr6G19430_001	PANTHER:PTHR33177	SEG:seg	UniParc:UPI000295B438
UniProt:M0T8E1	MapMan:35.2	:	:	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G19430_001]

Coordinates

chr6:+:13718464..13718814

Molecular Weight (calculated)

12527.6 Da

IEP (calculated)

8.216

GRAVY (calculated)

-0.928

Length

116 amino acids

Sequence
(BLAST)

001: MSRNHGKNPK LNFTGKQMRA RGGPSTRAVV EEEEEEEEDS SSSSSSSRSP PSSCVSSEGE QKLGSPEATS MVLAGCPRCL MYVMLSEKDP KCPKCNSTVL
101: LDFHRGNTSA GKNRKS

Best Arabidopsis Sequence Match ( AT5G06270.2 )
(BLAST)

001: MSRRSPKLEL KLNLSPPTSS QRRMVRSPSR SATTSPTSPP SSCVSSEMNQ DEPSVRYSTS PETTSMVLVG CPRCLMYVML SEDDPKCPKC KSTVLLDFLH
101: ENATNANANA AAASSGRKTR RN

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FNI1]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.