Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P07800_001 | Banana | cytosol, extracellular | 25.6 | 64.0 |
| KRH67976 | Soybean | nucleus, plastid | 45.6 | 52.29 |
| KRG96232 | Soybean | nucleus, plastid | 45.6 | 52.29 |
| GSMUA_Achr8P16130_001 | Banana | cytosol | 41.6 | 50.49 |
| GSMUA_Achr11P... | Banana | nucleus | 42.4 | 49.53 |
| Bra009178.1-P | Field mustard | plastid | 48.0 | 48.78 |
| CDY64732 | Canola | plastid | 48.0 | 48.78 |
| AT5G06270.1 | Thale cress | mitochondrion, plastid | 46.4 | 47.54 |
| Bra005888.1-P | Field mustard | plastid | 45.6 | 47.11 |
| Solyc10g083140.1.1 | Tomato | plastid | 25.6 | 47.06 |
| AT3G11600.1 | Thale cress | plastid | 44.0 | 47.01 |
| GSMUA_Achr10P... | Banana | cytosol | 44.0 | 46.61 |
| KRH30377 | Soybean | plastid | 40.8 | 46.36 |
| CDY47258 | Canola | plastid | 44.8 | 46.28 |
| CDX80998 | Canola | plastid | 44.0 | 45.45 |
| Bra028737.1-P | Field mustard | plastid | 44.0 | 45.45 |
| Bra038666.1-P | Field mustard | plastid | 41.6 | 44.83 |
| KRH25293 | Soybean | plastid | 38.4 | 44.04 |
| TraesCS4B01G346800.1 | Wheat | plastid | 40.0 | 43.48 |
| TraesCS2D01G294500.1 | Wheat | cytosol | 40.0 | 43.48 |
| TraesCS2B01G312800.1 | Wheat | cytosol | 40.0 | 43.48 |
| TraesCS2A01G296600.1 | Wheat | cytosol | 40.0 | 43.48 |
| PGSC0003DMT400072576 | Potato | plastid | 36.8 | 43.4 |
| Bra034826.1-P | Field mustard | plastid | 40.8 | 43.22 |
| CDY14087 | Canola | plastid | 46.4 | 42.96 |
| CDY08510 | Canola | nucleus, plastid | 40.0 | 42.37 |
| Zm00001d025361_P001 | Maize | nucleus | 37.6 | 42.34 |
| GSMUA_Achr6P19430_001 | Banana | nucleus | 39.2 | 42.24 |
| Os04t0415000-01 | Rice | cytosol | 39.2 | 42.24 |
| CDX73863 | Canola | plastid | 40.0 | 42.02 |
| Bra001413.1-P | Field mustard | plastid | 40.0 | 42.02 |
| EES10769 | Sorghum | mitochondrion | 38.4 | 41.74 |
| CDY01039 | Canola | mitochondrion, nucleus | 39.2 | 41.53 |
| Os02t0536500-01 | Rice | mitochondrion | 40.8 | 41.46 |
| GSMUA_Achr9P02640_001 | Banana | cytosol | 38.4 | 40.68 |
| CDY04984 | Canola | plastid | 42.4 | 39.26 |
| PGSC0003DMT400050486 | Potato | cytosol, plastid | 36.8 | 38.98 |
| Solyc06g073990.1.1 | Tomato | nucleus, plastid | 36.0 | 37.82 |
| KRH22650 | Soybean | cytosol, plastid | 32.0 | 37.38 |
| Solyc01g007870.2.1 | Tomato | nucleus | 37.6 | 37.3 |
| PGSC0003DMT400042213 | Potato | cytosol | 39.2 | 37.12 |
| EES05192 | Sorghum | nucleus, plastid | 42.4 | 36.81 |
| PGSC0003DMT400015190 | Potato | nucleus, plastid | 36.0 | 36.59 |
| Zm00001d003763_P001 | Maize | cytosol | 37.6 | 35.88 |
| KRH26665 | Soybean | plastid | 28.8 | 34.95 |
| Zm00001d016743_P001 | Maize | nucleus | 41.6 | 34.67 |
| KRH22649 | Soybean | cytosol | 18.4 | 34.33 |
| HORVU2Hr1G073380.7 | Barley | cytosol, mitochondrion, nucleus, plastid | 38.4 | 34.04 |
| KRH22648 | Soybean | nucleus, plastid | 31.2 | 32.23 |
| KRH26667 | Soybean | nucleus, plastid | 28.8 | 32.14 |
| KRH26666 | Soybean | cytosol | 28.8 | 31.86 |
| VIT_08s0007g02600.t01 | Wine grape | plastid | 47.2 | 27.06 |
| GSMUA_Achr6P12990_001 | Banana | nucleus | 38.4 | 23.53 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P07030_001 | EnsemblPlants:GSMUA_Achr6T07030_001 | EnsemblPlantsGene:GSMUA_Achr6G07030_001 | PANTHER:PTHR33177 | PANTHER:PTHR33177:SF8 | SEG:seg |
| UniParc:UPI000295BC49 | UniProt:M0T4V2 | MapMan:35.2 | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G07030_001]
Coordinates
chr6:+:4766245..4766622
Molecular Weight (calculated)
12804.4 Da
IEP (calculated)
8.844
GRAVY (calculated)
-0.018
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCSRRSEKV DLKLNLSLLP TASGRDEASP QGYASSSSLS SPSSCLSSEA ELGLTSPVSP TAAPSMVLAG CPRCLMYVML SAADLRCPKC GSTVLLDFYG
101: GSGAAVTTTT ATATATKNKK KARMS
101: GSGAAVTTTT ATATATKNKK KARMS
1: MRNKNGKRGS VEPSARTVAS VVANGRFEGR SPSSDTSSSQ NSCLTRTEEV KEEVASSWVD EEEAPEMVVM GCRSCMMYVM VLQERQRCPK CKCTDLIFF
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q1G396]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.