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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • cytosol 2
  • mitochondrion 3
  • plasma membrane 1
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus, plasma membrane
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY08510 Canola nucleus, plastid 98.31 98.31
CDY01039 Canola mitochondrion, nucleus 94.92 94.92
Bra038666.1-P Field mustard plastid 78.81 80.17
Bra001413.1-P Field mustard plastid 74.58 73.95
AT3G11600.1 Thale cress plastid 71.19 71.79
GSMUA_Achr8P07800_001 Banana cytosol, extracellular 26.27 62.0
KRH67976 Soybean nucleus, plastid 56.78 61.47
KRG96232 Soybean nucleus, plastid 56.78 61.47
Bra028737.1-P Field mustard plastid 60.17 58.68
Bra009178.1-P Field mustard plastid 60.17 57.72
Bra005888.1-P Field mustard plastid 58.47 57.02
GSMUA_Achr8P16130_001 Banana cytosol 42.37 48.54
Solyc06g073990.1.1 Tomato nucleus, plastid 48.31 47.9
TraesCS7D01G324300.1 Wheat cytosol 26.27 47.69
GSMUA_Achr11P... Banana nucleus 41.53 45.79
Zm00001d001776_P001 Maize cytosol, plastid 30.51 45.0
Os08t0102250-00 Rice cytosol 25.42 44.12
TraesCS2D01G379500.1 Wheat cytosol 30.51 43.9
PGSC0003DMT400015190 Potato nucleus, plastid 45.76 43.9
TraesCS2B01G400400.1 Wheat cytosol 30.51 43.37
GSMUA_Achr10P... Banana cytosol 43.22 43.22
PGSC0003DMT400050486 Potato cytosol, plastid 43.22 43.22
TraesCS2A01G383200.1 Wheat cytosol 29.66 42.68
HORVU2Hr1G089140.1 Barley cytosol 29.66 42.17
Zm00001d038287_P001 Maize mitochondrion 46.61 41.98
Os04t0684600-01 Rice cytosol 28.81 41.98
TraesCS4B01G346800.1 Wheat plastid 40.68 41.74
TraesCS2D01G294500.1 Wheat cytosol 40.68 41.74
TraesCS2B01G312800.1 Wheat cytosol 40.68 41.74
TraesCS2A01G296600.1 Wheat cytosol 40.68 41.74
Zm00001d025361_P001 Maize nucleus 38.98 41.44
TraesCS1D01G275300.1 Wheat nucleus 46.61 41.35
TraesCS1A01G275700.1 Wheat plastid 46.61 41.04
GSMUA_Achr6P07030_001 Banana cytosol, plastid 43.22 40.8
EES11682 Sorghum cytosol, plastid 32.2 40.43
EES10769 Sorghum mitochondrion 38.98 40.0
Os04t0415000-01 Rice cytosol 38.98 39.66
GSMUA_Achr6P19430_001 Banana nucleus 38.98 39.66
Os05t0442000-00 Rice cytosol, mitochondrion, nucleus, plastid 44.07 39.39
GSMUA_Achr9P02640_001 Banana cytosol 38.98 38.98
TraesCS3D01G368200.1 Wheat plastid 41.53 38.89
HORVU3Hr1G083720.1 Barley plastid 41.53 38.89
TraesCS2D01G597400.1 Wheat cytosol, plastid 27.97 38.82
TraesCS3B01G407900.1 Wheat plastid 41.53 38.58
TraesCS3A01G375700.1 Wheat plastid 40.68 37.8
Zm00001d042754_P001 Maize mitochondrion, plastid 38.98 37.4
Os01t0863500-01 Rice plastid 40.68 37.21
Zm00001d003763_P001 Maize cytosol 38.98 35.11
Os02t0536500-01 Rice mitochondrion 35.59 34.15
HORVU2Hr1G073380.7 Barley cytosol, mitochondrion, nucleus, plastid 39.83 33.33
OQU87905 Sorghum mitochondrion, plastid 33.05 33.05
HORVU1Hr1G074000.6 Barley mitochondrion 44.92 32.72
Zm00001d016743_P001 Maize nucleus 39.83 31.33
EES05192 Sorghum nucleus, plastid 38.14 31.25
VIT_08s0007g02600.t01 Wine grape plastid 56.78 30.73
EES19598 Sorghum cytosol, plastid 47.46 30.6
TraesCS1B01G284900.1 Wheat extracellular, plastid, vacuole 46.61 30.05
GSMUA_Achr6P12990_001 Banana nucleus 29.66 17.16
Protein Annotations
EnsemblPlants:Bra034826.1EnsemblPlants:Bra034826.1-PEnsemblPlantsGene:Bra034826PANTHER:PTHR33177PANTHER:PTHR33177:SF8UniParc:UPI000254762F
UniProt:M4F180MapMan:35.2::::
Description
AT3G11600 (E=6e-045) | unknown protein
Coordinates
chrA05:-:21596048..21596404
Molecular Weight (calculated)
12978.6 Da
IEP (calculated)
8.502
GRAVY (calculated)
-0.476
Length
118 amino acids
Sequence
(BLAST)
001: MSRRNRSGPK LELKLNLSPS PSQGEQMSMV RSPSRSNTAS PNSCVSSEPS QEEMETPISM VLVGCPRCLM YVMLSQDEPK CPKCKSTVLL DFFHENASVD
101: TTAPAVTTKR NKSLITNI
Best Arabidopsis Sequence Match ( AT3G11600.1 )
(BLAST)
001: MSRRNKNGPK LELRLNLSPP PSQASQMSLV RSPNRSNTTS PSSCVSSETN QEENETITSM VLVGCPRCLM YVMLSDDDPK CPKCKSTVLL DFLQENAFAA
101: TTATAANTRR KKKTWWN
Arabidopsis Description
E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:Q9SRN4]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.