Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- golgi 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 1
- cytosol 2
- nucleus 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P07800_001 | Banana | cytosol, extracellular | 41.18 | 56.0 |
| TraesCS7D01G324300.1 | Wheat | cytosol | 52.94 | 55.38 |
| Os04t0684600-01 | Rice | cytosol | 55.88 | 46.91 |
| Zm00001d001776_P001 | Maize | cytosol, plastid | 48.53 | 41.25 |
| EES11682 | Sorghum | cytosol, plastid | 51.47 | 37.23 |
| Solyc10g083140.1.1 | Tomato | plastid | 35.29 | 35.29 |
| GSMUA_Achr6P19430_001 | Banana | nucleus | 52.94 | 31.03 |
| GSMUA_Achr10P... | Banana | cytosol | 52.94 | 30.51 |
| KRH22649 | Soybean | cytosol | 29.41 | 29.85 |
| KRH67976 | Soybean | nucleus, plastid | 47.06 | 29.36 |
| KRG96232 | Soybean | nucleus, plastid | 47.06 | 29.36 |
| KRH30377 | Soybean | plastid | 47.06 | 29.09 |
| KRH25293 | Soybean | plastid | 45.59 | 28.44 |
| Bra038666.1-P | Field mustard | plastid | 45.59 | 26.72 |
| KRH22650 | Soybean | cytosol, plastid | 41.18 | 26.17 |
| Bra034826.1-P | Field mustard | plastid | 44.12 | 25.42 |
| CDY08510 | Canola | nucleus, plastid | 44.12 | 25.42 |
| CDY01039 | Canola | mitochondrion, nucleus | 44.12 | 25.42 |
| Os04t0415000-01 | Rice | cytosol | 42.65 | 25.0 |
| AT3G11600.1 | Thale cress | plastid | 42.65 | 24.79 |
| PGSC0003DMT400072576 | Potato | plastid | 38.24 | 24.53 |
| Os02t0536500-01 | Rice | mitochondrion | 44.12 | 24.39 |
| Os01t0863500-01 | Rice | plastid | 45.59 | 24.03 |
| Bra028737.1-P | Field mustard | plastid | 42.65 | 23.97 |
| CDY47258 | Canola | plastid | 42.65 | 23.97 |
| Bra005888.1-P | Field mustard | plastid | 42.65 | 23.97 |
| AT5G06270.1 | Thale cress | mitochondrion, plastid | 42.65 | 23.77 |
| CDY64732 | Canola | plastid | 42.65 | 23.58 |
| Bra009178.1-P | Field mustard | plastid | 42.65 | 23.58 |
| CDX73863 | Canola | plastid | 41.18 | 23.53 |
| Bra001413.1-P | Field mustard | plastid | 41.18 | 23.53 |
| Solyc06g073990.1.1 | Tomato | nucleus, plastid | 41.18 | 23.53 |
| KRH26665 | Soybean | plastid | 35.29 | 23.3 |
| CDX80998 | Canola | plastid | 41.18 | 23.14 |
| PGSC0003DMT400015190 | Potato | nucleus, plastid | 41.18 | 22.76 |
| KRH26667 | Soybean | nucleus, plastid | 36.76 | 22.32 |
| KRH22648 | Soybean | nucleus, plastid | 39.71 | 22.31 |
| CDY14087 | Canola | plastid | 44.12 | 22.22 |
| Solyc01g007870.2.1 | Tomato | nucleus | 41.18 | 22.22 |
| KRH26666 | Soybean | cytosol | 36.76 | 22.12 |
| PGSC0003DMT400050486 | Potato | cytosol, plastid | 38.24 | 22.03 |
| PGSC0003DMT400042213 | Potato | cytosol | 42.65 | 21.97 |
| Os05t0442000-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 41.18 | 21.21 |
| CDY04984 | Canola | plastid | 41.18 | 20.74 |
| VIT_08s0007g02600.t01 | Wine grape | plastid | 45.59 | 14.22 |
Protein Annotations
| EnsemblPlants:Os08t0102250-00 | EnsemblPlantsGene:Os08g0102250 | PANTHER:PTHR33177 | PANTHER:PTHR33177:SF20 | PFscan:PS51257 | ProteinID:BAT03411.1 |
| SEG:seg | UniParc:UPI000393B889 | UniProt:A0A0P0XAU6 | MapMan:35.2 | : | : |
Description
Similar to H0913C04.5 protein. (Os08t0102250-00)
Coordinates
chr8:+:120633..125645
Molecular Weight (calculated)
7307.9 Da
IEP (calculated)
8.221
GRAVY (calculated)
-0.096
Length
68 amino acids
Sequence
(BLAST)
(BLAST)
1: MESPARSCVS SEAEDQQAAA AAMVVAGCPR CLMYVMLAVS NTKQPRCPRC NTPVLLHFHN ISSTPNKS
001: MSRRNKNGPK LELRLNLSPP PSQASQMSLV RSPNRSNTTS PSSCVSSETN QEENETITSM VLVGCPRCLM YVMLSDDDPK CPKCKSTVLL DFLQENAFAA
101: TTATAANTRR KKKTWWN
101: TTATAANTRR KKKTWWN
Arabidopsis Description
E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:Q9SRN4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.