Factsheet for Os02t0536500-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
plasma membrane 1
plastid 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0415000-01	Rice	cytosol	54.47	57.76
KRH67976	Soybean	nucleus, plastid	43.9	49.54
KRG96232	Soybean	nucleus, plastid	43.9	49.54
EES05192	Sorghum	nucleus, plastid	56.91	48.61
GSMUA_Achr11P...	Banana	nucleus	41.46	47.66
Zm00001d016743_P001	Maize	nucleus	56.91	46.67
GSMUA_Achr8P16130_001	Banana	cytosol	39.02	46.6
Os04t0684600-01	Rice	cytosol	29.27	44.44
Os08t0102250-00	Rice	cytosol	24.39	44.12
AT5G06270.1	Thale cress	mitochondrion, plastid	43.09	43.44
Bra028737.1-P	Field mustard	plastid	42.28	42.98
CDY64732	Canola	plastid	42.28	42.28
Bra009178.1-P	Field mustard	plastid	42.28	42.28
CDX80998	Canola	plastid	41.46	42.15
Solyc10g083140.1.1	Tomato	plastid	22.76	41.18
GSMUA_Achr6P07030_001	Banana	cytosol, plastid	41.46	40.8
CDY47258	Canola	plastid	39.84	40.5
Bra005888.1-P	Field mustard	plastid	39.02	39.67
CDY14087	Canola	plastid	42.28	38.52
Solyc01g007870.2.1	Tomato	nucleus	39.02	38.1
Bra038666.1-P	Field mustard	plastid	35.77	37.93
KRH25293	Soybean	plastid	33.33	37.61
AT3G11600.1	Thale cress	plastid	35.77	37.61
KRH22649	Soybean	cytosol	20.33	37.31
KRH30377	Soybean	plastid	33.33	37.27
PGSC0003DMT400042213	Potato	cytosol	39.84	37.12
PGSC0003DMT400072576	Potato	plastid	31.71	36.79
GSMUA_Achr9P02640_001	Banana	cytosol	34.96	36.44
CDY04984	Canola	plastid	39.84	36.3
CDX73863	Canola	plastid	34.96	36.13
Bra001413.1-P	Field mustard	plastid	34.96	36.13
Bra034826.1-P	Field mustard	plastid	34.15	35.59
Solyc06g073990.1.1	Tomato	nucleus, plastid	34.15	35.29
Os01t0863500-01	Rice	plastid	36.59	34.88
CDY08510	Canola	nucleus, plastid	33.33	34.75
KRH22650	Soybean	cytosol, plastid	30.08	34.58
PGSC0003DMT400015190	Potato	nucleus, plastid	34.15	34.15
CDY01039	Canola	mitochondrion, nucleus	32.52	33.9
Os05t0442000-00	Rice	cytosol, mitochondrion, nucleus, plastid	35.77	33.33
KRH26667	Soybean	nucleus, plastid	29.27	32.14
KRH26665	Soybean	plastid	26.83	32.04
PGSC0003DMT400050486	Potato	cytosol, plastid	29.27	30.51
KRH26666	Soybean	cytosol	26.83	29.2
KRH22648	Soybean	nucleus, plastid	26.83	27.27
VIT_08s0007g02600.t01	Wine grape	plastid	43.09	24.31
GSMUA_Achr6P12990_001	Banana	nucleus	36.59	22.06

Protein Annotations

EMBL:AK073251	EnsemblPlants:Os02t0536500-01	EnsemblPlantsGene:Os02g0536500	EntrezGene:4329572	PANTHER:PTHR33177	PANTHER:PTHR33177:SF3
ProteinID:BAD27812.1	ProteinID:BAF08958.1	ProteinID:BAS79067.1	RefSeq:XP_015626568.1	SEG:seg	UniParc:UPI00003CE505
UniProt:Q6EU57	MapMan:35.2	:	:	:	:

Description

Similar to H0622F05.5 protein. (Os02t0536500-01)

Coordinates

chr2:-:19797819..19798718

Molecular Weight (calculated)

12666.0 Da

IEP (calculated)

7.874

GRAVY (calculated)

-0.315

Length

123 amino acids

Sequence
(BLAST)

001: MSGGGGGGRG MTRGLDLKLN LSLPAVARAV SPAADDESSP SSCLSSESEL RQQHGGGGGQ LQWSDSPEAT SMVLAACPRC FLYVMLAEAD PRCPKCRSPV
101: ILDFLHAGGG GGINADGRRH RRG

Best Arabidopsis Sequence Match ( AT5G06270.2 )
(BLAST)

001: MSRRSPKLEL KLNLSPPTSS QRRMVRSPSR SATTSPTSPP SSCVSSEMNQ DEPSVRYSTS PETTSMVLVG CPRCLMYVML SEDDPKCPKC KSTVLLDFLH
101: ENATNANANA AAASSGRKTR RN

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FNI1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.