Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g073990.1.1 | Tomato | nucleus, plastid | 85.37 | 88.24 |
| GSMUA_Achr8P07800_001 | Banana | cytosol, extracellular | 22.76 | 56.0 |
| KRH67976 | Soybean | nucleus, plastid | 47.15 | 53.21 |
| KRG96232 | Soybean | nucleus, plastid | 47.15 | 53.21 |
| AT5G06270.1 | Thale cress | mitochondrion, plastid | 48.78 | 49.18 |
| PGSC0003DMT400050486 | Potato | cytosol, plastid | 47.15 | 49.15 |
| CDY47258 | Canola | plastid | 47.97 | 48.76 |
| Bra009178.1-P | Field mustard | plastid | 47.97 | 47.97 |
| CDY64732 | Canola | plastid | 47.97 | 47.97 |
| Bra028737.1-P | Field mustard | plastid | 47.15 | 47.93 |
| Bra005888.1-P | Field mustard | plastid | 46.34 | 47.11 |
| CDX73863 | Canola | plastid | 45.53 | 47.06 |
| Bra001413.1-P | Field mustard | plastid | 45.53 | 47.06 |
| Bra038666.1-P | Field mustard | plastid | 43.9 | 46.55 |
| CDX80998 | Canola | plastid | 45.53 | 46.28 |
| PGSC0003DMT400072576 | Potato | plastid | 39.84 | 46.23 |
| TraesCS7D01G324300.1 | Wheat | cytosol | 24.39 | 46.15 |
| Bra034826.1-P | Field mustard | plastid | 43.9 | 45.76 |
| CDY08510 | Canola | nucleus, plastid | 43.9 | 45.76 |
| GSMUA_Achr6P19430_001 | Banana | nucleus | 43.09 | 45.69 |
| CDY01039 | Canola | mitochondrion, nucleus | 43.09 | 44.92 |
| GSMUA_Achr11P... | Banana | nucleus | 39.02 | 44.86 |
| AT3G11600.1 | Thale cress | plastid | 42.28 | 44.44 |
| GSMUA_Achr10P... | Banana | cytosol | 41.46 | 43.22 |
| CDY14087 | Canola | plastid | 47.15 | 42.96 |
| CDY04984 | Canola | plastid | 47.15 | 42.96 |
| GSMUA_Achr8P16130_001 | Banana | cytosol | 35.77 | 42.72 |
| PGSC0003DMT400042213 | Potato | cytosol | 44.72 | 41.67 |
| Os08t0102250-00 | Rice | cytosol | 22.76 | 41.18 |
| Zm00001d025361_P001 | Maize | nucleus | 36.59 | 40.54 |
| Zm00001d001776_P001 | Maize | cytosol, plastid | 26.02 | 40.0 |
| TraesCS2A01G296600.1 | Wheat | cytosol | 37.4 | 40.0 |
| TraesCS2B01G312800.1 | Wheat | cytosol | 37.4 | 40.0 |
| TraesCS2D01G294500.1 | Wheat | cytosol | 37.4 | 40.0 |
| TraesCS4B01G346800.1 | Wheat | plastid | 37.4 | 40.0 |
| Os04t0684600-01 | Rice | cytosol | 26.02 | 39.51 |
| TraesCS2A01G383200.1 | Wheat | cytosol | 26.02 | 39.02 |
| TraesCS2D01G379500.1 | Wheat | cytosol | 26.02 | 39.02 |
| TraesCS2B01G400400.1 | Wheat | cytosol | 26.02 | 38.55 |
| HORVU2Hr1G089140.1 | Barley | cytosol | 26.02 | 38.55 |
| EES10769 | Sorghum | mitochondrion | 35.77 | 38.26 |
| Os04t0415000-01 | Rice | cytosol | 35.77 | 37.93 |
| EES11682 | Sorghum | cytosol, plastid | 28.46 | 37.23 |
| TraesCS1D01G275300.1 | Wheat | nucleus | 39.84 | 36.84 |
| TraesCS1A01G275700.1 | Wheat | plastid | 39.84 | 36.57 |
| GSMUA_Achr6P07030_001 | Banana | cytosol, plastid | 36.59 | 36.0 |
| Os01t0863500-01 | Rice | plastid | 37.4 | 35.66 |
| TraesCS2D01G597400.1 | Wheat | cytosol, plastid | 24.39 | 35.29 |
| TraesCS3D01G368200.1 | Wheat | plastid | 35.77 | 34.92 |
| HORVU3Hr1G083720.1 | Barley | plastid | 35.77 | 34.92 |
| OQU87905 | Sorghum | mitochondrion, plastid | 33.33 | 34.75 |
| TraesCS3B01G407900.1 | Wheat | plastid | 35.77 | 34.65 |
| TraesCS3A01G375700.1 | Wheat | plastid | 35.77 | 34.65 |
| Zm00001d003763_P001 | Maize | cytosol | 36.59 | 34.35 |
| Zm00001d038287_P001 | Maize | mitochondrion | 36.59 | 34.35 |
| Zm00001d042754_P001 | Maize | mitochondrion, plastid | 34.15 | 34.15 |
| Os02t0536500-01 | Rice | mitochondrion | 34.15 | 34.15 |
| Os05t0442000-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 36.59 | 34.09 |
| EES05192 | Sorghum | nucleus, plastid | 39.84 | 34.03 |
| GSMUA_Achr9P02640_001 | Banana | cytosol | 31.71 | 33.05 |
| HORVU2Hr1G073380.7 | Barley | cytosol, mitochondrion, nucleus, plastid | 37.4 | 32.62 |
| Zm00001d016743_P001 | Maize | nucleus | 37.4 | 30.67 |
| HORVU1Hr1G074000.6 | Barley | mitochondrion | 39.84 | 30.25 |
| VIT_08s0007g02600.t01 | Wine grape | plastid | 48.78 | 27.52 |
| TraesCS1B01G284900.1 | Wheat | extracellular, plastid, vacuole | 39.84 | 26.78 |
| EES19598 | Sorghum | cytosol, plastid | 36.59 | 24.59 |
| GSMUA_Achr6P12990_001 | Banana | nucleus | 30.08 | 18.14 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400015190 | EnsemblPlantsGene:PGSC0003DMG400005933 | PANTHER:PTHR33177 | PANTHER:PTHR33177:SF8 | PGSC:PGSC0003DMG400005933 | SEG:seg |
| UniParc:UPI000296004E | UniProt:M1A5L8 | MapMan:35.2 | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400005933]
Coordinates
chr6:+:54599758..54600923
Molecular Weight (calculated)
14004.6 Da
IEP (calculated)
8.758
GRAVY (calculated)
-0.833
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MNYRRESSHD PKLDLKLNLS PPRENNNNNI FPISPSRSSS SYTSSMERSP ASSCISREPT PDDHNHQQFF GSPEATTTSM MLVGCPRCLM YVMLSVKDPK
101: CPKCKSSVLL DFFREDRIKN TKN
101: CPKCKSSVLL DFFREDRIKN TKN
001: MSRRSPKLEL KLNLSPPTSS QRRMVRSPSR SATTSPTSPP SSCVSSEMNQ DEPSVRYSTS PETTSMVLVG CPRCLMYVML SEDDPKCPKC KSTVLLDFLH
101: ENATNANANA AAASSGRKTR RN
101: ENATNANANA AAASSGRKTR RN
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9FNI1]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.