Factsheet for HORVU2Hr1G089140.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 2
plasma membrane 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G379500.1	Wheat	cytosol	90.36	91.46
TraesCS2B01G400400.1	Wheat	cytosol	89.16	89.16
TraesCS2A01G383200.1	Wheat	cytosol	87.95	89.02
Os04t0684600-01	Rice	cytosol	67.47	69.14
Zm00001d001776_P001	Maize	cytosol, plastid	56.63	58.75
GSMUA_Achr8P07800_001	Banana	cytosol, extracellular	32.53	54.0
EES11682	Sorghum	cytosol, plastid	55.42	48.94
Solyc10g083140.1.1	Tomato	plastid	34.94	42.65
KRG96232	Soybean	nucleus, plastid	49.4	37.61
KRH67976	Soybean	nucleus, plastid	48.19	36.7
KRH22649	Soybean	cytosol	27.71	34.33
KRH30377	Soybean	plastid	44.58	33.64
AT5G06270.1	Thale cress	mitochondrion, plastid	48.19	32.79
PGSC0003DMT400072576	Potato	plastid	40.96	32.08
AT3G11600.1	Thale cress	plastid	44.58	31.62
Bra005888.1-P	Field mustard	plastid	45.78	31.41
CDY47258	Canola	plastid	45.78	31.41
GSMUA_Achr10P...	Banana	cytosol	44.58	31.36
GSMUA_Achr6P19430_001	Banana	nucleus	43.37	31.03
Bra038666.1-P	Field mustard	plastid	43.37	31.03
CDX80998	Canola	plastid	44.58	30.58
Bra028737.1-P	Field mustard	plastid	44.58	30.58
CDX73863	Canola	plastid	43.37	30.25
Bra001413.1-P	Field mustard	plastid	43.37	30.25
KRH22650	Soybean	cytosol, plastid	38.55	29.91
Bra034826.1-P	Field mustard	plastid	42.17	29.66
CDY01039	Canola	mitochondrion, nucleus	42.17	29.66
CDY08510	Canola	nucleus, plastid	42.17	29.66
HORVU3Hr1G083720.1	Barley	plastid	44.58	29.37
KRH25293	Soybean	plastid	38.55	29.36
Bra009178.1-P	Field mustard	plastid	43.37	29.27
CDY64732	Canola	plastid	43.37	29.27
CDY14087	Canola	plastid	46.99	28.89
Solyc06g073990.1.1	Tomato	nucleus, plastid	40.96	28.57
CDY04984	Canola	plastid	44.58	27.41
KRH26665	Soybean	plastid	33.73	27.18
PGSC0003DMT400015190	Potato	nucleus, plastid	38.55	26.02
KRH26666	Soybean	cytosol	34.94	25.66
PGSC0003DMT400050486	Potato	cytosol, plastid	36.14	25.42
Solyc01g007870.2.1	Tomato	nucleus	38.55	25.4
PGSC0003DMT400042213	Potato	cytosol	39.76	25.0
KRH26667	Soybean	nucleus, plastid	33.73	25.0
KRH22648	Soybean	nucleus, plastid	36.14	24.79
HORVU2Hr1G073380.7	Barley	cytosol, mitochondrion, nucleus, plastid	38.55	22.7
HORVU1Hr1G074000.6	Barley	mitochondrion	38.55	19.75
VIT_08s0007g02600.t01	Wine grape	plastid	44.58	16.97

Protein Annotations

EMBL:AK375347	EnsemblPlants:HORVU2Hr1G089140.1	EnsemblPlantsGene:HORVU2Hr1G089140	PANTHER:PTHR33177	PANTHER:PTHR33177:SF20	SEG:seg
UniParc:UPI0002008A6E	UniProt:F2EGS0	MapMan:35.2	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EGS0]

Coordinates

chrchr2H:-:637002923..637003775

Molecular Weight (calculated)

8595.3 Da

IEP (calculated)

5.613

GRAVY (calculated)

-0.067

Length

83 amino acids

Sequence
(BLAST)

1: MASMEESPTS SCVSSDTEEE SAAVTKPMVV VGCPQCLMYV MLSGAAEEPP RCPRCKSPVL LHFLHGAVAG AGAGANRQQP SKS

Best Arabidopsis Sequence Match ( AT3G11600.1 )
(BLAST)

001: MSRRNKNGPK LELRLNLSPP PSQASQMSLV RSPNRSNTTS PSSCVSSETN QEENETITSM VLVGCPRCLM YVMLSDDDPK CPKCKSTVLL DFLQENAFAA
101: TTATAANTRR KKKTWWN

Arabidopsis Description

E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:Q9SRN4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.