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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 3
  • cytosol 1
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY64732 Canola plastid 100.0 100.0
Bra028737.1-P Field mustard plastid 89.43 90.91
AT5G06270.1 Thale cress mitochondrion, plastid 89.43 90.16
Bra005888.1-P Field mustard plastid 83.74 85.12
KRG96232 Soybean nucleus, plastid 65.04 73.39
KRH67976 Soybean nucleus, plastid 65.04 73.39
GSMUA_Achr8P07800_001 Banana cytosol, extracellular 26.02 64.0
Bra038666.1-P Field mustard plastid 59.35 62.93
Bra001413.1-P Field mustard plastid 58.54 60.5
Bra034826.1-P Field mustard plastid 57.72 60.17
GSMUA_Achr10P... Banana cytosol 49.59 51.69
GSMUA_Achr8P16130_001 Banana cytosol 43.09 51.46
GSMUA_Achr11P... Banana nucleus 43.9 50.47
Solyc06g073990.1.1 Tomato nucleus, plastid 47.97 49.58
TraesCS2D01G294500.1 Wheat cytosol 46.34 49.57
TraesCS2B01G312800.1 Wheat cytosol 46.34 49.57
TraesCS2A01G296600.1 Wheat cytosol 46.34 49.57
TraesCS4B01G346800.1 Wheat plastid 46.34 49.57
Zm00001d025361_P001 Maize nucleus 44.72 49.55
Os04t0415000-01 Rice cytosol 46.34 49.14
GSMUA_Achr6P07030_001 Banana cytosol, plastid 48.78 48.0
PGSC0003DMT400015190 Potato nucleus, plastid 47.97 47.97
EES10769 Sorghum mitochondrion 44.72 47.83
TraesCS7D01G324300.1 Wheat cytosol 25.2 47.69
GSMUA_Achr6P19430_001 Banana nucleus 44.72 47.41
TraesCS2B01G400400.1 Wheat cytosol 31.71 46.99
TraesCS2D01G379500.1 Wheat cytosol 30.89 46.34
TraesCS2D01G597400.1 Wheat cytosol, plastid 31.71 45.88
TraesCS2A01G383200.1 Wheat cytosol 30.08 45.12
PGSC0003DMT400050486 Potato cytosol, plastid 43.09 44.92
Os04t0684600-01 Rice cytosol 29.27 44.44
Zm00001d001776_P001 Maize cytosol, plastid 28.46 43.75
HORVU2Hr1G089140.1 Barley cytosol 29.27 43.37
Os08t0102250-00 Rice cytosol 23.58 42.65
Os02t0536500-01 Rice mitochondrion 42.28 42.28
TraesCS3D01G368200.1 Wheat plastid 43.09 42.06
Zm00001d038287_P001 Maize mitochondrion 44.72 41.98
TraesCS3B01G407900.1 Wheat plastid 43.09 41.73
GSMUA_Achr9P02640_001 Banana cytosol 39.84 41.53
HORVU3Hr1G083720.1 Barley plastid 42.28 41.27
Zm00001d003763_P001 Maize cytosol 43.9 41.22
Os01t0863500-01 Rice plastid 43.09 41.09
TraesCS3A01G375700.1 Wheat plastid 42.28 40.94
Zm00001d042754_P001 Maize mitochondrion, plastid 40.65 40.65
EES11682 Sorghum cytosol, plastid 30.89 40.43
TraesCS1A01G275700.1 Wheat plastid 43.9 40.3
TraesCS1D01G275300.1 Wheat nucleus 43.09 39.85
Os05t0442000-00 Rice cytosol, mitochondrion, nucleus, plastid 41.46 38.64
VIT_08s0007g02600.t01 Wine grape plastid 68.29 38.53
EES05192 Sorghum nucleus, plastid 44.72 38.19
Zm00001d016743_P001 Maize nucleus 46.34 38.0
HORVU2Hr1G073380.7 Barley cytosol, mitochondrion, nucleus, plastid 43.09 37.59
OQU87905 Sorghum mitochondrion, plastid 34.96 36.44
HORVU1Hr1G074000.6 Barley mitochondrion 41.46 31.48
EES19598 Sorghum cytosol, plastid 43.09 28.96
TraesCS1B01G284900.1 Wheat extracellular, plastid, vacuole 43.09 28.96
GSMUA_Achr6P12990_001 Banana nucleus 37.4 22.55
Protein Annotations
EnsemblPlants:Bra009178.1EnsemblPlants:Bra009178.1-PEnsemblPlantsGene:Bra009178PANTHER:PTHR33177PANTHER:PTHR33177:SF8SEG:seg
UniParc:UPI0002544FE5UniProt:M4CY81MapMan:35.2:::
Description
AT5G06270 (E=8e-038) | unknown protein
Coordinates
chrA10:+:15547937..15548308
Molecular Weight (calculated)
13413.8 Da
IEP (calculated)
10.182
GRAVY (calculated)
-0.794
Length
123 amino acids
Sequence
(BLAST)
001: MSRRSPKVDL KLNLSPPTSS RRRMVRSPSR SATTSPTSPP SSCVSSEMNQ DESSVRYSSS PETTSMVLVG CPRCLMYVML SEDDPKCPKC QSTVLLDFNH
101: ENASNANART PGAGSSGRKT RRN
Best Arabidopsis Sequence Match ( AT5G06270.2 )
(BLAST)
001: MSRRSPKLEL KLNLSPPTSS QRRMVRSPSR SATTSPTSPP SSCVSSEMNQ DEPSVRYSTS PETTSMVLVG CPRCLMYVML SEDDPKCPKC KSTVLLDFLH
101: ENATNANANA AAASSGRKTR RN
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9FNI1]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.