Factsheet for GSMUA_Achr8P16130_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 2
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	nucleus	66.99	64.49
GSMUA_Achr8P07800_001	Banana	cytosol, extracellular	29.13	60.0
KRH67976	Soybean	nucleus, plastid	54.37	51.38
KRG96232	Soybean	nucleus, plastid	53.4	50.46
Zm00001d025361_P001	Maize	nucleus	53.4	49.55
TraesCS2D01G294500.1	Wheat	cytosol	54.37	48.7
EES10769	Sorghum	mitochondrion	54.37	48.7
Os04t0415000-01	Rice	cytosol	54.37	48.28
TraesCS2B01G312800.1	Wheat	cytosol	53.4	47.83
TraesCS2A01G296600.1	Wheat	cytosol	53.4	47.83
TraesCS4B01G346800.1	Wheat	plastid	52.43	46.96
AT5G06270.1	Thale cress	mitochondrion, plastid	51.46	43.44
GSMUA_Achr9P02640_001	Banana	cytosol	49.51	43.22
KRH25293	Soybean	plastid	45.63	43.12
Bra038666.1-P	Field mustard	plastid	48.54	43.1
Bra009178.1-P	Field mustard	plastid	51.46	43.09
CDY64732	Canola	plastid	51.46	43.09
CDY47258	Canola	plastid	50.49	42.98
CDX80998	Canola	plastid	50.49	42.98
CDX73863	Canola	plastid	49.51	42.86
Bra001413.1-P	Field mustard	plastid	49.51	42.86
AT3G11600.1	Thale cress	plastid	48.54	42.73
Solyc10g083140.1.1	Tomato	plastid	28.16	42.65
Bra034826.1-P	Field mustard	plastid	48.54	42.37
Zm00001d003763_P001	Maize	cytosol	53.4	41.98
KRH26665	Soybean	plastid	41.75	41.75
GSMUA_Achr6P07030_001	Banana	cytosol, plastid	50.49	41.6
CDY08510	Canola	nucleus, plastid	47.57	41.53
PGSC0003DMT400072576	Potato	plastid	42.72	41.51
Bra005888.1-P	Field mustard	plastid	48.54	41.32
KRH30377	Soybean	plastid	43.69	40.91
CDY01039	Canola	mitochondrion, nucleus	46.6	40.68
GSMUA_Achr10P...	Banana	cytosol	46.6	40.68
GSMUA_Achr6P19430_001	Banana	nucleus	45.63	40.52
HORVU2Hr1G073380.7	Barley	cytosol, mitochondrion, nucleus, plastid	54.37	39.72
Bra028737.1-P	Field mustard	plastid	46.6	39.67
Os02t0536500-01	Rice	mitochondrion	46.6	39.02
KRH22650	Soybean	cytosol, plastid	39.81	38.32
EES05192	Sorghum	nucleus, plastid	53.4	38.19
Solyc06g073990.1.1	Tomato	nucleus, plastid	42.72	36.97
Solyc01g007870.2.1	Tomato	nucleus	44.66	36.51
PGSC0003DMT400042213	Potato	cytosol	46.6	36.36
CDY14087	Canola	plastid	47.57	36.3
PGSC0003DMT400015190	Potato	nucleus, plastid	42.72	35.77
PGSC0003DMT400050486	Potato	cytosol, plastid	40.78	35.59
CDY04984	Canola	plastid	45.63	34.81
KRH22649	Soybean	cytosol	21.36	32.84
Zm00001d016743_P001	Maize	nucleus	47.57	32.67
KRH26666	Soybean	cytosol	34.95	31.86
KRH26667	Soybean	nucleus, plastid	33.01	30.36
KRH22648	Soybean	nucleus, plastid	33.01	28.1
VIT_08s0007g02600.t01	Wine grape	plastid	52.43	24.77
GSMUA_Achr6P12990_001	Banana	nucleus	45.63	23.04

Protein Annotations

EnsemblPlants:GSMUA_Achr8P16130_001	EnsemblPlants:GSMUA_Achr8T16130_001	EnsemblPlantsGene:GSMUA_Achr8G16130_001	PANTHER:PTHR33177	PANTHER:PTHR33177:SF8	SEG:seg
UniParc:UPI000296ECB0	UniProt:M0TQW6	MapMan:35.2	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G16130_001]

Coordinates

chr8:+:13921666..13921977

Molecular Weight (calculated)

10986.1 Da

IEP (calculated)

9.105

GRAVY (calculated)

-0.461

Length

103 amino acids

Sequence
(BLAST)

001: MSRRRGQKVD LKLNLAPPPP TRGDTSRRAA AAAVSDGESS PSSCLSSDAD SPEATSSMVL AACPRCLMYV MLSKDDARCP KCKSAVLLDF LHDSTTTKTT
101: RKP

Best Arabidopsis Sequence Match ( AT3G11600.1 )
(BLAST)

001: MSRRNKNGPK LELRLNLSPP PSQASQMSLV RSPNRSNTTS PSSCVSSETN QEENETITSM VLVGCPRCLM YVMLSDDDPK CPKCKSTVLL DFLQENAFAA
101: TTATAANTRR KKKTWWN

Arabidopsis Description

E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:Q9SRN4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.